HHsearch alignment for GI: 254780552 and conserved domain: KOG0742

Probab=99.71  E-value=5e-17  Score=123.65  Aligned_cols=163  Identities=23%  Similarity=0.332  Sum_probs=112.2

Q ss_pred             CCCC-HHHHCCHHHHHHHHHH---HHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC-----CH
Q ss_conf             7898-7782397999999999---9998661467767079973788557789999998618985312576443-----34
Q gi|254780552|r   23 RPRT-LEEFTGQVEACSNLKV---FIEAAKARAEALDHVLFVGPPGLGKTTLAQVVARELGVNFRSTSGPVIA-----KA   93 (334)
Q Consensus        23 RP~~-l~dviGQ~~~~~~l~~---~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~~~~~-----~~   93 (334)
T Consensus       349 ~gk~pl~~ViL~psLe~Rie~lA~aTaNTK~h~apfRNilfyGPPGTGKTm~ArelAr~SGlDYA~mTGGDVAPlG~qaV  428 (630)
T KOG0742         349 RGKDPLEGVILHPSLEKRIEDLAIATANTKKHQAPFRNILFYGPPGTGKTMFARELARHSGLDYAIMTGGDVAPLGAQAV  428 (630)
T ss_pred             CCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCHHHHEEEECCCCCCHHHHHHHHHHHCCCCEEHHCCCCCCCCHHHHH
T ss_conf             57777678412777999999998874043002430440032479998604999999885287410013787555217889


Q ss_pred             HHHHHHHHH---HHCCCHHHHHHHHHCCH----HH-HHHHHHHHHCCCCCCC-CCCCCCCCEEECCCCCCEEEECCCCCC
Q ss_conf             676666664---10163788875761698----99-9999998634751002-567876520004667400552045543
Q gi|254780552|r   94 GDLAALLTN---LEDRDVLFIDEIHRLSI----IV-EEILYPAMEDFQLDLM-VGEGPSARSVKINLSRFTLIAATTRVG  164 (334)
Q Consensus        94 ~dl~~~~~~---~~~~~vlfiDEihrl~~----~~-q~~Ll~~mE~~~i~i~-~~~~~~a~~~~~~~~~f~lI~ATt~~~  164 (334)
T Consensus       429 TkiH~lFDWakkS~rGLllFIDEADAFLceRnktymSEaqRsaLNAl---LfRTGd--q-------SrdivLvlAtNrpg  496 (630)
T KOG0742         429 TKIHKLFDWAKKSRRGLLLFIDEADAFLCERNKTYMSEAQRSALNAL---LFRTGD--Q-------SRDIVLVLATNRPG  496 (630)
T ss_pred             HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHH---HHHCCC--C-------CCCEEEEEECCCCC
T ss_conf             99999878875156644998611678998752010258899999889---876256--5-------54268996058832


Q ss_pred             CCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHH
Q ss_conf             355454420120673264547999998777654
Q gi|254780552|r  165 LLTNPLQDRFGIPIRLNFYEIEDLKTIVQRGAK  197 (334)
Q Consensus       165 ~l~~~l~sR~~~~~~~~~~~~~el~~il~~~~~  197 (334)
T Consensus       497 dlDsAV~DRide~veFpLPGeEERfkll~lYln  529 (630)
T KOG0742         497 DLDSAVNDRIDEVVEFPLPGEEERFKLLNLYLN  529 (630)
T ss_pred             CHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHH
T ss_conf             101678765554130689977899999999999