HHsearch alignment for GI: 254780552 and conserved domain: KOG0989
>KOG0989 consensus.
Probab=100.00 E-value=5.2e-39 Score=258.06 Aligned_cols=201 Identities=27% Similarity=0.340 Sum_probs=158.6
Q ss_pred HHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCC----CC--CCCCCCC
Q ss_conf 57875078987782397999999999999866146776707997378855778999999861898----53--1257644
Q gi|254780552|r 17 ADISLLRPRTLEEFTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVARELGVN----FR--STSGPVI 90 (334)
Q Consensus 17 ~~~~~lRP~~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~----~~--~~s~~~~ 90 (334)
T Consensus 25 swteKYrPkt~de~~gQe~vV~~L~~a~~~-----~~lp~~LFyGPpGTGKTStalafar~L~~~~~~~~rvl~lnaSde 99 (346)
T KOG0989 25 SWTEKYRPKTFDELAGQEHVVQVLKNALLR-----RILPHYLFYGPPGTGKTSTALAFARALNCEQLFPCRVLELNASDE 99 (346)
T ss_pred CHHHHHCCCCHHHHCCHHHHHHHHHHHHHH-----CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCC
T ss_conf 537874787377650159999999999860-----688607866899986768999999985574235554243136600
Q ss_pred CCH-------HHHHHHHHHH--------HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCE
Q ss_conf 334-------6766666641--------0163788875761698999999998634751002567876520004667400
Q gi|254780552|r 91 AKA-------GDLAALLTNL--------EDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFT 155 (334)
Q Consensus 91 ~~~-------~dl~~~~~~~--------~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~ 155 (334)
T Consensus 100 rGisvvr~Kik~fakl~~~~~~~~~~~~~~fKiiIlDEcdsmtsdaq~aLrr~mE~~s~-----------~t-------r 161 (346)
T KOG0989 100 RGISVVREKIKNFAKLTVLLKRSDGYPCPPFKIIILDECDSMTSDAQAALRRTMEDFSR-----------TT-------R 161 (346)
T ss_pred CCCCCHHHHHCCHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCC-----------CE-------E
T ss_conf 14310066523799875025565678898632899741645309999999999862546-----------65-------9
Q ss_pred EEECCCCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 55204554335545442012067326454799999877765412101111111233202210156788777543334554
Q gi|254780552|r 156 LIAATTRVGLLTNPLQDRFGIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRLLRRVRDFAEV 235 (334)
Q Consensus 156 lI~ATt~~~~l~~~l~sR~~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~AlnlLe~v~d~a~~ 235 (334)
T Consensus 162 FiLIcnylsrii~pi~SRC~-KfrFk~L~d~~iv~rL~~Ia~~E~v~~d~~al~~I~~~S~GdLR~Ait~Lqsls~---- 236 (346)
T KOG0989 162 FILICNYLSRIIRPLVSRCQ-KFRFKKLKDEDIVDRLEKIASKEGVDIDDDALKLIAKISDGDLRRAITTLQSLSL---- 236 (346)
T ss_pred EEEECCCHHHCCHHHHHHHH-HHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHC----
T ss_conf 99973885647728774677-7128876447899999999888589978789999999738728999999998610----
Q ss_pred HCCCCCCHHHH
Q ss_conf 15886427787
Q gi|254780552|r 236 AHAKTITREIA 246 (334)
Q Consensus 236 ~~~~~i~~~~~ 246 (334)
T Consensus 237 -~gk~It~~~~ 246 (346)
T KOG0989 237 -LGKRITTSLV 246 (346)
T ss_pred -CCCCCCHHHH
T ss_conf -4763645889