HHsearch alignment for GI: 254780552 and conserved domain: KOG2028
>KOG2028 consensus.
Probab=100.00 E-value=0 Score=468.29 Aligned_cols=277 Identities=25% Similarity=0.292 Sum_probs=230.8
Q ss_pred CHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCC---CCCCCCCCCCC
Q ss_conf 057875078987782397999999999999866146776707997378855778999999861898---53125764433
Q gi|254780552|r 16 DADISLLRPRTLEEFTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVARELGVN---FRSTSGPVIAK 92 (334)
Q Consensus 16 ~~~~~~lRP~~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~---~~~~s~~~~~~ 92 (334)
T Consensus 126 ~PLaermRPktL~dyvGQ~hlv~q~gllrs~ie--q~~ipSmIlWGppG~GKTtlArlia~tsk~~SyrfvelSA-t~a~ 202 (554)
T KOG2028 126 KPLAERMRPKTLDDYVGQSHLVGQDGLLRSLIE--QNRIPSMILWGPPGTGKTTLARLIASTSKKHSYRFVELSA-TNAK 202 (554)
T ss_pred CCHHHHCCCCHHHHHCCHHHHCCCCHHHHHHHH--CCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEC-CCCC
T ss_conf 974554184368775053441483268999987--0888705886699876588999998605777427999741-4566
Q ss_pred HHHHHHHHHHH-------HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCC
Q ss_conf 46766666641-------01637888757616989999999986347510025678765200046674005520455433
Q gi|254780552|r 93 AGDLAALLTNL-------EDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRVGL 165 (334)
Q Consensus 93 ~~dl~~~~~~~-------~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~~ 165 (334)
T Consensus 203 t~dvR~ife~aq~~~~l~krkTilFiDEiHRFNksQQD~fLP~VE~G~I--------------------~lIGATTENPS 262 (554)
T KOG2028 203 TNDVRDIFEQAQNEKSLTKRKTILFIDEIHRFNKSQQDTFLPHVENGDI--------------------TLIGATTENPS 262 (554)
T ss_pred HHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCCCCEECCCCE--------------------EEEECCCCCCC
T ss_conf 1889999999887876524406987377655323211003421306706--------------------99853668976
Q ss_pred --CCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHC-----------C--CHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf --5545442012067326454799999877765412-----------1--011111112332022101567887775433
Q gi|254780552|r 166 --LTNPLQDRFGIPIRLNFYEIEDLKTIVQRGAKLT-----------G--LAVTDEAACEIAMRSRGTPRIAGRLLRRVR 230 (334)
Q Consensus 166 --l~~~l~sR~~~~~~~~~~~~~el~~il~~~~~~~-----------~--i~~~~~al~~ia~~s~Gd~R~AlnlLe~v~ 230 (334)
T Consensus 263 Fqln~aLlSRC~-VfvLekL~~n~v~~iL~raia~l~dser~~~~l~n~s~~ve~siidyla~lsdGDaR~aLN~Lems~ 341 (554)
T KOG2028 263 FQLNAALLSRCR-VFVLEKLPVNAVVTILMRAIASLGDSERPTDPLPNSSMFVEDSIIDYLAYLSDGDARAALNALEMSL 341 (554)
T ss_pred CCHHHHHHHCCC-EEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 011277873160-6673368889999999999876321025688999831245688999998704731888877899999
Q ss_pred HHHHH-HC---CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 34554-15---886427787876542100000046776889999997518662069999998287456746789999998
Q gi|254780552|r 231 DFAEV-AH---AKTITREIADAALLRLAIDKMGFDQLDLRYLTMIARNFGGGPVGIETISAGLSEPRDAIEDLIEPYMIQ 306 (334)
Q Consensus 231 d~a~~-~~---~~~i~~~~~~~~l~~~~id~~Gl~~~d~~~L~~l~~~~~~g~~~~~~isA~~ks~RgS~~daa~~yL~r 306 (334)
T Consensus 342 ~m~~tr~g~~~~~~lSidDvke~lq~s~~-----------------~YDr~Ge~HYntISA~HKSmRG~D~nAslY~LaR 404 (554)
T KOG2028 342 SMFCTRSGQSSRVLLSIDDVKEGLQRSHI-----------------LYDRAGEEHYNTISALHKSMRGSDQNASLYWLAR 404 (554)
T ss_pred HHHHHHCCCCCCCEECHHHHHHHHHHCCC-----------------EECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 98875247765640028889999853120-----------------0045530577899999876017765527999999
Q ss_pred HHHCCCCHH--HHHHHHHHHHHCCCCCCC
Q ss_conf 343058718--999999888664888889
Q gi|254780552|r 307 QGFIQRTPR--GRLLMPIAWQHLGIDIPH 333 (334)
Q Consensus 307 ~g~~~~~pr--gRrL~~~a~EdiGla~P~ 333 (334)
T Consensus 405 MLegGEdPLYVARRlvR~ASEDIGlaD~S 433 (554)
T KOG2028 405 MLEGGEDPLYVARRLVRFASEDIGLADPS 433 (554)
T ss_pred HHCCCCCCHHHHHHHHHHHHCCCCCCCCH
T ss_conf 97168870799999998751033767803