HHsearch alignment for GI: 254780552 and conserved domain: KOG2028

>KOG2028 consensus.
Probab=100.00  E-value=0  Score=468.29  Aligned_cols=277  Identities=25%  Similarity=0.292  Sum_probs=230.8

Q ss_pred             CHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCC---CCCCCCCCCCC
Q ss_conf             057875078987782397999999999999866146776707997378855778999999861898---53125764433
Q gi|254780552|r   16 DADISLLRPRTLEEFTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVARELGVN---FRSTSGPVIAK   92 (334)
Q Consensus        16 ~~~~~~lRP~~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~---~~~~s~~~~~~   92 (334)
T Consensus       126 ~PLaermRPktL~dyvGQ~hlv~q~gllrs~ie--q~~ipSmIlWGppG~GKTtlArlia~tsk~~SyrfvelSA-t~a~  202 (554)
T KOG2028         126 KPLAERMRPKTLDDYVGQSHLVGQDGLLRSLIE--QNRIPSMILWGPPGTGKTTLARLIASTSKKHSYRFVELSA-TNAK  202 (554)
T ss_pred             CCHHHHCCCCHHHHHCCHHHHCCCCHHHHHHHH--CCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEC-CCCC
T ss_conf             974554184368775053441483268999987--0888705886699876588999998605777427999741-4566


Q ss_pred             HHHHHHHHHHH-------HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCC
Q ss_conf             46766666641-------01637888757616989999999986347510025678765200046674005520455433
Q gi|254780552|r   93 AGDLAALLTNL-------EDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRVGL  165 (334)
Q Consensus        93 ~~dl~~~~~~~-------~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~~  165 (334)
T Consensus       203 t~dvR~ife~aq~~~~l~krkTilFiDEiHRFNksQQD~fLP~VE~G~I--------------------~lIGATTENPS  262 (554)
T KOG2028         203 TNDVRDIFEQAQNEKSLTKRKTILFIDEIHRFNKSQQDTFLPHVENGDI--------------------TLIGATTENPS  262 (554)
T ss_pred             HHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCCCCEECCCCE--------------------EEEECCCCCCC
T ss_conf             1889999999887876524406987377655323211003421306706--------------------99853668976


Q ss_pred             --CCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHC-----------C--CHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf             --5545442012067326454799999877765412-----------1--011111112332022101567887775433
Q gi|254780552|r  166 --LTNPLQDRFGIPIRLNFYEIEDLKTIVQRGAKLT-----------G--LAVTDEAACEIAMRSRGTPRIAGRLLRRVR  230 (334)
Q Consensus       166 --l~~~l~sR~~~~~~~~~~~~~el~~il~~~~~~~-----------~--i~~~~~al~~ia~~s~Gd~R~AlnlLe~v~  230 (334)
T Consensus       263 Fqln~aLlSRC~-VfvLekL~~n~v~~iL~raia~l~dser~~~~l~n~s~~ve~siidyla~lsdGDaR~aLN~Lems~  341 (554)
T KOG2028         263 FQLNAALLSRCR-VFVLEKLPVNAVVTILMRAIASLGDSERPTDPLPNSSMFVEDSIIDYLAYLSDGDARAALNALEMSL  341 (554)
T ss_pred             CCHHHHHHHCCC-EEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             011277873160-6673368889999999999876321025688999831245688999998704731888877899999


Q ss_pred             HHHHH-HC---CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             34554-15---886427787876542100000046776889999997518662069999998287456746789999998
Q gi|254780552|r  231 DFAEV-AH---AKTITREIADAALLRLAIDKMGFDQLDLRYLTMIARNFGGGPVGIETISAGLSEPRDAIEDLIEPYMIQ  306 (334)
Q Consensus       231 d~a~~-~~---~~~i~~~~~~~~l~~~~id~~Gl~~~d~~~L~~l~~~~~~g~~~~~~isA~~ks~RgS~~daa~~yL~r  306 (334)
T Consensus       342 ~m~~tr~g~~~~~~lSidDvke~lq~s~~-----------------~YDr~Ge~HYntISA~HKSmRG~D~nAslY~LaR  404 (554)
T KOG2028         342 SMFCTRSGQSSRVLLSIDDVKEGLQRSHI-----------------LYDRAGEEHYNTISALHKSMRGSDQNASLYWLAR  404 (554)
T ss_pred             HHHHHHCCCCCCCEECHHHHHHHHHHCCC-----------------EECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf             98875247765640028889999853120-----------------0045530577899999876017765527999999


Q ss_pred             HHHCCCCHH--HHHHHHHHHHHCCCCCCC
Q ss_conf             343058718--999999888664888889
Q gi|254780552|r  307 QGFIQRTPR--GRLLMPIAWQHLGIDIPH  333 (334)
Q Consensus       307 ~g~~~~~pr--gRrL~~~a~EdiGla~P~  333 (334)
T Consensus       405 MLegGEdPLYVARRlvR~ASEDIGlaD~S  433 (554)
T KOG2028         405 MLEGGEDPLYVARRLVRFASEDIGLADPS  433 (554)
T ss_pred             HHCCCCCCHHHHHHHHHHHHCCCCCCCCH
T ss_conf             97168870799999998751033767803