HHsearch alignment for GI: 254780552 and conserved domain: KOG2035

Probab=99.90  E-value=3.2e-22  Score=155.41  Aligned_cols=211  Identities=26%  Similarity=0.325  Sum_probs=154.5

Q ss_pred             HHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC-CCC----------CCCCC
Q ss_conf             7875078987782397999999999999866146776707997378855778999999861-898----------53125
Q gi|254780552|r   18 DISLLRPRTLEEFTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVAREL-GVN----------FRSTS   86 (334)
Q Consensus        18 ~~~~lRP~~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l-~~~----------~~~~s   86 (334)
T Consensus         3 Wvdkyrpksl~~l~~~~e~~~~Lksl~~-----~~d~PHll~yGPSGaGKKTrimclL~elYG~gveklki~~~t~~tpS   77 (351)
T KOG2035           3 WVDKYRPKSLDELIYHEELANLLKSLSS-----TGDFPHLLVYGPSGAGKKTRIMCLLRELYGVGVEKLKIETRTFTTPS   77 (351)
T ss_pred             CHHHCCCCHHHHCCCHHHHHHHHHHHCC-----CCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHEEEEEEEEECCC
T ss_conf             3665075114303318888899987414-----57787078888898872111899999885787245056667886488


Q ss_pred             CC-----------CCC-CHHHH--------HHHH----------HHH-HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCC
Q ss_conf             76-----------443-34676--------6666----------641-01637888757616989999999986347510
Q gi|254780552|r   87 GP-----------VIA-KAGDL--------AALL----------TNL-EDRDVLFIDEIHRLSIIVEEILYPAMEDFQLD  135 (334)
Q Consensus        87 ~~-----------~~~-~~~dl--------~~~~----------~~~-~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~  135 (334)
T Consensus        78 ~kklEistvsS~yHlEitPSDaG~~DRvViQellKevAQt~qie~~~qr~fKvvvi~ead~LT~dAQ~aLRRTMEkYs~-  156 (351)
T KOG2035          78 KKKLEISTVSSNYHLEITPSDAGNYDRVVIQELLKEVAQTQQIETQGQRPFKVVVINEADELTRDAQHALRRTMEKYSS-  156 (351)
T ss_pred             CCEEEEEEECCCCEEEECHHHCCCCCHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHC-
T ss_conf             8637999942565177473433751179999999998741413332666548999803576508899999999999860-


Q ss_pred             CCCCCCCCCCEEECCCCCCEEEECCCCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
Q ss_conf             02567876520004667400552045543355454420120673264547999998777654121011111112332022
Q gi|254780552|r  136 LMVGEGPSARSVKINLSRFTLIAATTRVGLLTNPLQDRFGIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRS  215 (334)
Q Consensus       136 i~~~~~~~a~~~~~~~~~f~lI~ATt~~~~l~~~l~sR~~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s  215 (334)
T Consensus       157 ----------~~-------RlIl~cns~SriIepIrSRC-l~iRvpaps~eeI~~vl~~v~~kE~l~lp~~~l~rIa~kS  218 (351)
T KOG2035         157 ----------NC-------RLILVCNSTSRIIEPIRSRC-LFIRVPAPSDEEITSVLSKVLKKEGLQLPKELLKRIAEKS  218 (351)
T ss_pred             ----------CC-------EEEEEECCCCCCHHHHHHHE-EEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             ----------71-------69999267430226776220-5876789987899999999998733448499999999970


Q ss_pred             CCCHHHHHHHHHHHHHH--HHHHCCCCCCHHHHHHHHHH
Q ss_conf             10156788777543334--55415886427787876542
Q gi|254780552|r  216 RGTPRIAGRLLRRVRDF--AEVAHAKTITREIADAALLR  252 (334)
Q Consensus       216 ~Gd~R~AlnlLe~v~d~--a~~~~~~~i~~~~~~~~l~~  252 (334)
T Consensus       219 ~~nLRrAllmlE~~~~~n~~~~a~~~~i~~~dWe~~i~e  257 (351)
T KOG2035         219 NRNLRRALLMLEAVRVNNEPFTANSQVIPKPDWEIYIQE  257 (351)
T ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             643999999999998546543255787799449999999