HHsearch alignment for GI: 254780552 and conserved domain: PRK00149
>PRK00149 dnaA chromosomal replication initiation protein; Reviewed.
Probab=99.71 E-value=1.1e-15 Score=115.44 Aligned_cols=258 Identities=23% Similarity=0.317 Sum_probs=162.1
Q ss_pred HCCCC-CHHHHC-CHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC-----CCCCCCCCCCCCCC-
Q ss_conf 50789-877823-97999999999999866146776707997378855778999999861-----89853125764433-
Q gi|254780552|r 21 LLRPR-TLEEFT-GQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVAREL-----GVNFRSTSGPVIAK- 92 (334)
Q Consensus 21 ~lRP~-~l~dvi-GQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l-----~~~~~~~s~~~~~~- 92 (334)
T Consensus 111 ~Ln~~yTFdnFVvG~sN~lA-~aAA~~Va~~pg~~yNPLfIyG~~GlGKTHLl~AIgn~~~~~~p~~~v~Y~tae~F~~~ 189 (447)
T PRK00149 111 NLNPKYTFDNFVVGKSNRLA-HAAALAVAENPGKAYNPLFIYGGVGLGKTHLLHAIGNYILEKNPNAKVVYVSSEKFTND 189 (447)
T ss_pred CCCCCCCCCCCEECCCCHHH-HHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHH
T ss_conf 88855603262226985999-99999998376767785589779988788999999999998589972899549999999
Q ss_pred ------HHHHHHHHHHHHCCCHHHHHHHHHCCH--HHHHHHHHHH----HCCCCCCCCCCCCCCCEEECCCCCCEEEECC
Q ss_conf ------467666666410163788875761698--9999999986----3475100256787652000466740055204
Q gi|254780552|r 93 ------AGDLAALLTNLEDRDVLFIDEIHRLSI--IVEEILYPAM----EDFQLDLMVGEGPSARSVKINLSRFTLIAAT 160 (334)
Q Consensus 93 ------~~dl~~~~~~~~~~~vlfiDEihrl~~--~~q~~Ll~~m----E~~~i~i~~~~~~~a~~~~~~~~~f~lI~AT 160 (334)
T Consensus 190 ~v~al~~~~~~~Fr~~yr~~DvLliDDiqfl~gk~~tqeeff~~fn~l~~~~kq---------------------iv~ts 248 (447)
T PRK00149 190 FVKALRNNAMEEFKEKYRSVDVLLIDDIQFLAGKEKTQEEFFHTFNALHENNKQ---------------------IVITS 248 (447)
T ss_pred HHHHHHCCCHHHHHHHHHCCCEEEECHHHHHHCCHHHHHHHHHHHHHHHHCCCE---------------------EEEEC
T ss_conf 999985186999999997288543214888605577999999999999984996---------------------89957
Q ss_pred CCCC----CCCHHHHHCC--CCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 5543----3554544201--206732645479999987776541210111111123320221015678877754333455
Q gi|254780552|r 161 TRVG----LLTNPLQDRF--GIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRLLRRVRDFAE 234 (334)
Q Consensus 161 t~~~----~l~~~l~sR~--~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~AlnlLe~v~d~a~ 234 (334)
T Consensus 249 d~~P~~l~~l~~rL~SRf~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~~l~~~v~~~iA~~~~~nvR~LeGal~~l~a~~~ 328 (447)
T PRK00149 249 DRPPKELEGLEDRLRSRFEWGLTVDIEPPDLETRVAILQKKAEEEGINLPNEVLEFIAKRIRSNIRELEGALNRLVAYAS 328 (447)
T ss_pred CCCHHHCCCCCHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 88967656511778867637626510599999999999999997289999899999997126889999999999999999
Q ss_pred HHCCCCCCHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC---CCHHHHHHHHHHHHH
Q ss_conf 4158864277878765421-00000046776889999997518662069999998287456---746789999998343
Q gi|254780552|r 235 VAHAKTITREIADAALLRL-AIDKMGFDQLDLRYLTMIARNFGGGPVGIETISAGLSEPRD---AIEDLIEPYMIQQGF 309 (334)
Q Consensus 235 ~~~~~~i~~~~~~~~l~~~-~id~~Gl~~~d~~~L~~l~~~~~~g~~~~~~isA~~ks~Rg---S~~daa~~yL~r~g~ 309 (334)
T Consensus 329 ~~~~-~i~~~~~~~~l~~~~~~~~~~it~--~~I~~~Va~~f~i~------~~dl~s~~R~~~i~~aRqiamyL~r~~t 398 (447)
T PRK00149 329 LTGR-PITLELAKEALKDLLRLQKKQITI--ENIQKVVAEYYNVK------VSDLKSKRRTRNIARPRQIAMYLAKELT 398 (447)
T ss_pred HHCC-CCCHHHHHHHHHHHHHCCCCCCCH--HHHHHHHHHHHCCC------HHHHCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 8689-999999999999874036787899--99999999880983------9995378888445589999999999885