HHsearch alignment for GI: 254780552 and conserved domain: PRK05642

Probab=99.66  E-value=2.4e-15  Score=113.36  Aligned_cols=205  Identities=22%  Similarity=0.259  Sum_probs=138.0

Q ss_pred             CCHHHHC-C-HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC---CCCCCCCCCCCCCCHHHHHHH
Q ss_conf             9877823-9-7999999999999866146776707997378855778999999861---898531257644334676666
Q gi|254780552|r   25 RTLEEFT-G-QVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVAREL---GVNFRSTSGPVIAKAGDLAAL   99 (334)
Q Consensus        25 ~~l~dvi-G-Q~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l---~~~~~~~s~~~~~~~~dl~~~   99 (334)
T Consensus        16 ~tfdnFi~g~N~~a~~~~~~l~~~~~--~~~~~~l~i~G~~G~GKTHLL~A~~~~~~~~~~~~~yl~~~~~~--~~~~~~   91 (234)
T PRK05642         16 ATFANYYPGANAAALGYVERLCEADA--GWTESLIYLWGKDGVGRSHLLQAACLRFEQRGEPAVYLPLAELL--DRGPEL   91 (234)
T ss_pred             CCHHCCCCCCCHHHHHHHHHHHHCCC--CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHH--HHHHHH
T ss_conf             77303571875999999999876067--87788389988999988999999999998079967997899987--544999


Q ss_pred             HHHHHCCCHHHHHHHHHCC--HHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCC-CC---CHHHHHC
Q ss_conf             6641016378887576169--8999999998634751002567876520004667400552045543-35---5454420
Q gi|254780552|r  100 LTNLEDRDVLFIDEIHRLS--IIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRVG-LL---TNPLQDR  173 (334)
Q Consensus       100 ~~~~~~~~vlfiDEihrl~--~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~-~l---~~~l~sR  173 (334)
T Consensus        92 ~~~l~~~d~l~IDDi~~i~g~~~~e~~lF~l~N~~~-----~~~-----------~-~llits~~~P~~l~~~l~DL~SR  154 (234)
T PRK05642         92 LDNLEQYELVCIDDLDVIAGKADWEEALFHLFNRLR-----DSG-----------R-RLLLAASKSPRELPVKLPDLKSR  154 (234)
T ss_pred             HHHHHHCCEEEEECHHHHCCCHHHHHHHHHHHHHHH-----HCC-----------C-EEEEECCCCHHHHCCCHHHHHHH
T ss_conf             862422798989364554688599999999999999-----839-----------9-59995787955523001679999


Q ss_pred             CC--CEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             12--0673264547999998777654121011111112332022101567887775433345541588642778787654
Q gi|254780552|r  174 FG--IPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRLLRRVRDFAEVAHAKTITREIADAALL  251 (334)
Q Consensus       174 ~~--~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~AlnlLe~v~d~a~~~~~~~i~~~~~~~~l~  251 (334)
T Consensus       155 l~~~~~~~i~~l~d~~~~~iL~~~a~~rgi~l~~~v~~yl~~r~~R~~~~L~~~l~~Ld-~~sl~~kr~iTiplvk~vLg  233 (234)
T PRK05642        155 LTLALVFQMRGLSDEDKLRALQLRASRRGLHLTDEVGHFILTRGTRSMSALFDLLERLD-QASLQAQRKLTIPFLKETLG  233 (234)
T ss_pred             HHCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH-HHHHHHCCCCCHHHHHHHHC
T ss_conf             95781275148998999999999977546899989999999973588999999999999-99998389999999999838