HHsearch alignment for GI: 254780552 and conserved domain: PRK05707

>PRK05707 DNA polymerase III subunit delta'; Validated.
Probab=99.79  E-value=2.2e-18  Score=131.95  Aligned_cols=152  Identities=21%  Similarity=0.273  Sum_probs=109.6

Q ss_pred             CCCC-EEEECCCCCCHHHHHHHHHHHCCCCC-------------CCCC---CCC---C--------CCHHHHHHHHHHH-
Q ss_conf             7670-79973788557789999998618985-------------3125---764---4--------3346766666641-
Q gi|254780552|r   53 ALDH-VLFVGPPGLGKTTLAQVVARELGVNF-------------RSTS---GPV---I--------AKAGDLAALLTNL-  103 (334)
Q Consensus        53 ~~~h-~Lf~GPpG~GKTtlA~iiA~~l~~~~-------------~~~s---~~~---~--------~~~~dl~~~~~~~-  103 (334)
T Consensus        20 rl~HA~Lf~G~~G~GK~~lA~~~A~~LlC~~~~~~~~Cg~C~sC~~~~~~~HPD~~~i~pe~~~~~I~IdqIR~l~~~~~   99 (328)
T PRK05707         20 RHAHAYLLHGPAGIGKRALAERLAAFLLCEAPQGGGACGSCKGCQLLAAGSHPDNFVLEPEEADKPIKVDQVRELVSFVV   99 (328)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
T ss_conf             82204644799986799999999999848999998999888899998758999879984266677697999999999983


Q ss_pred             -----HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCHHHHHCCCCEE
Q ss_conf             -----016378887576169899999999863475100256787652000466740055204554335545442012067
Q gi|254780552|r  104 -----EDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRVGLLTNPLQDRFGIPI  178 (334)
Q Consensus       104 -----~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~~l~~~l~sR~~~~~  178 (334)
T Consensus       100 ~~~~~g~~KV~iI~~Ae~m~~~AaNALLKtLEE----------Pp--------~~t~fiL~t~~~~~lLpTI~SRCq-~~  160 (328)
T PRK05707        100 QTAQLGGRKVVLIEPAEAMNRNAANALLKSLEE----------PS--------GQTVLLLISHQPSRLLPTIKSRCQ-QL  160 (328)
T ss_pred             HCCCCCCCEEEEEEHHHHHCHHHHHHHHHHHHC----------CC--------CCEEEEEEECCHHHCHHHHHHCCE-EE
T ss_conf             176678957999502877389999999998507----------89--------875999860993448258874141-33


Q ss_pred             ECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             3264547999998777654121011111112332022101567887775
Q gi|254780552|r  179 RLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRLLR  227 (334)
Q Consensus       179 ~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~AlnlLe  227 (334)
T Consensus       161 ~~~~p~~e~~~~~L~~~~----~~~~~~~a~~ll~la~G~p~~A~~l~~  205 (328)
T PRK05707        161 ACPLPSNEPSLQWLQQAL----PESDAEERIELLTLAAGSPLRALQLHA  205 (328)
T ss_pred             ECCCCCHHHHHHHHHHHC----CCCCHHHHHHHHHHCCCCHHHHHHHHC
T ss_conf             489989999999999755----655789999999974999999998748