HHsearch alignment for GI: 254780552 and conserved domain: PRK05917

>PRK05917 DNA polymerase III subunit delta'; Validated.
Probab=99.71  E-value=2.4e-16  Score=119.48  Aligned_cols=133  Identities=14%  Similarity=0.152  Sum_probs=86.2

Q ss_pred             CCCCE-EEECCCCCCHHHHHHHHHHHCCCC----------------CCCCC--CC-CCCCHHHHHHHHHHH------HCC
Q ss_conf             76707-997378855778999999861898----------------53125--76-443346766666641------016
Q gi|254780552|r   53 ALDHV-LFVGPPGLGKTTLAQVVARELGVN----------------FRSTS--GP-VIAKAGDLAALLTNL------EDR  106 (334)
Q Consensus        53 ~~~h~-Lf~GPpG~GKTtlA~iiA~~l~~~----------------~~~~s--~~-~~~~~~dl~~~~~~~------~~~  106 (334)
T Consensus        17 Rl~HAyLf~Gp~G~GK~~~A~~~A~~LLc~~~p~~~~~i~~~~HPD~~~i~pe~k~~~~~Id~iR~l~~~i~~~p~~g~~   96 (290)
T PRK05917         17 KVPSAILLHGQDLSNLSQYAYELASLILLESSPEAQYKISQKIHPDIHEFFPEGKGRLHSIETPRAIKKQIWIHPYEANY   96 (290)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf             96606876899986599999999999857899616889874689985996157778878678999999996418646882


Q ss_pred             CHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCHHHHHCCCCEEECCCCCHH
Q ss_conf             37888757616989999999986347510025678765200046674005520455433554544201206732645479
Q gi|254780552|r  107 DVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRVGLLTNPLQDRFGIPIRLNFYEIE  186 (334)
Q Consensus       107 ~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~~l~~~l~sR~~~~~~~~~~~~~  186 (334)
T Consensus        97 KV~IId~Ad~Mn~~AaNALLKtLEE----------PP~--------~tvfILit~~~~~lLpTI~SRCQ-~I~i~~~---  154 (290)
T PRK05917         97 KIYIIHEADRMTLDAISAFLKVLED----------PPK--------HSVIILTSAKPQRLPPTIRSRSL-SIHIPGE---  154 (290)
T ss_pred             EEEEECCHHHHCHHHHHHHHHHHCC----------CCC--------CEEEEEEECCHHHCCHHHHHCCC-EEECCCC---
T ss_conf             6999756776389999999997347----------987--------85999986992548237763351-1677762---


Q ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCH
Q ss_conf             999987776541210111111123320221015
Q gi|254780552|r  187 DLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTP  219 (334)
Q Consensus       187 el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~  219 (334)
T Consensus       155 ------------e~~~i~~e~~~~l~~~a~g~~  175 (290)
T PRK05917        155 ------------EKTLPSKEDIAYLIRYAQGKE  175 (290)
T ss_pred             ------------CCCCCCHHHHHHHHHHHCCCH
T ss_conf             ------------013478899999999846973