HHsearch alignment for GI: 254780552 and conserved domain: PRK06585
>PRK06585 holA DNA polymerase III subunit delta; Reviewed.
Probab=97.66 E-value=0.0019 Score=40.63 Aligned_cols=75 Identities=16% Similarity=0.133 Sum_probs=62.1
Q ss_pred CEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 06732645479999987776541210111111123320221015678877754333455415886427787876542
Q gi|254780552|r 176 IPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRLLRRVRDFAEVAHAKTITREIADAALLR 252 (334)
Q Consensus 176 ~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~AlnlLe~v~d~a~~~~~~~i~~~~~~~~l~~ 252 (334)
T Consensus 135 ~~i~cY~d~~~~l~~~i~~~l~~~g~~i~~~a~~~L~~~~g~d~~~~~~EleKL~ly~--~~~~~It~edv~~~v~~ 209 (343)
T PRK06585 135 AAIPCYADDERDLARLIDDELAKAGLRITPDARAYLVALLGGDRLASRNEIEKLALYA--HGKGEITLDDVRAVVGD 209 (343)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH--CCCCCCCHHHHHHHHCC
T ss_conf 9995006998899999999999829997799999999873427999999999999984--89997899999998686