HHsearch alignment for GI: 254780552 and conserved domain: PRK06964
>PRK06964 DNA polymerase III subunit delta'; Validated.
Probab=99.64 E-value=3.8e-15 Score=112.15 Aligned_cols=148 Identities=21% Similarity=0.265 Sum_probs=102.7
Q ss_pred CCCCE-EEECCCCCCHHHHHHHHHHHCCCC--------CC------CC---CCCCC------------------------
Q ss_conf 76707-997378855778999999861898--------53------12---57644------------------------
Q gi|254780552|r 53 ALDHV-LFVGPPGLGKTTLAQVVARELGVN--------FR------ST---SGPVI------------------------ 90 (334)
Q Consensus 53 ~~~h~-Lf~GPpG~GKTtlA~iiA~~l~~~--------~~------~~---s~~~~------------------------ 90 (334)
T Consensus 19 rl~HA~Lf~Gp~G~Gk~~lA~~~A~~llC~~~~~~~~~Cg~C~sC~~~~~~~HPD~~~i~Pe~~~~~~~~~~~~~~~~~~ 98 (342)
T PRK06964 19 RWPHALLLHGQAGIGKLAFAQHLAQGLLCETPQPNGEPCGTCAACTWFAQGNHPDYRIVRPEALAAEAPGAADDAKAADA 98 (342)
T ss_pred CHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCHHCCCCCCCCCHHHHHHH
T ss_conf 71305765799986799999999999838999988897867777888862799974553400210223332100101112
Q ss_pred -------------CCHHHHHHHHHHH------HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCC
Q ss_conf -------------3346766666641------016378887576169899999999863475100256787652000466
Q gi|254780552|r 91 -------------AKAGDLAALLTNL------EDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINL 151 (334)
Q Consensus 91 -------------~~~~dl~~~~~~~------~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~ 151 (334)
T Consensus 99 ~~~~~~~~~~~~~I~idqiR~l~~~l~~~~~~g~~kVviI~~Ae~mn~~aaNalLK~LEE----------Pp~------- 161 (342)
T PRK06964 99 DEGGKKTRAPSKEIKIEQVRALLDFCGVGSHRGGARVVVLYPAEALNVAAANALLKTLEE----------PPP------- 161 (342)
T ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCHHHHHHHHHHHCC----------CCC-------
T ss_conf 221012356556454999999999970075458844999827787389999999997237----------987-------
Q ss_pred CCCEEEECCCCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 7400552045543355454420120673264547999998777654121011111112332022101567887775
Q gi|254780552|r 152 SRFTLIAATTRVGLLTNPLQDRFGIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRLLR 227 (334)
Q Consensus 152 ~~f~lI~ATt~~~~l~~~l~sR~~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~AlnlLe 227 (334)
T Consensus 162 -~~~~iL~~~~~~~llpTI~SRcq-~~~~~~~~~~~~~~~L~~----~~v~---~a~~l-la~a~G~p~~Al~l~~ 227 (342)
T PRK06964 162 -GVVFLLVSARIDRLLPTILSRCR-QWPMTVPAPEAAAAWLAA----QGVA---DANAL-LAEAGGAPLAALALAS 227 (342)
T ss_pred -CEEEEEEECCHHHCCHHHHHCCE-EECCCCCCHHHHHHHHHH----CCCC---CHHHH-HHHCCCCHHHHHHHHC
T ss_conf -84899986992548368876764-302899599999999987----3986---39999-9880999899998716