HHsearch alignment for GI: 254780552 and conserved domain: PRK07132
>PRK07132 DNA polymerase III subunit delta'; Validated.
Probab=99.82 E-value=5.4e-20 Score=141.81 Aligned_cols=138 Identities=10% Similarity=0.123 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCE-EEECCCCCCHHHHHHHHHHHCCCCCCCC--------CCCCCC------CHHHHH
Q ss_conf 7999999999999866146776707-9973788557789999998618985312--------576443------346766
Q gi|254780552|r 33 QVEACSNLKVFIEAAKARAEALDHV-LFVGPPGLGKTTLAQVVARELGVNFRST--------SGPVIA------KAGDLA 97 (334)
Q Consensus 33 Q~~~~~~l~~~i~a~~~~~~~~~h~-Lf~GPpG~GKTtlA~iiA~~l~~~~~~~--------s~~~~~------~~~dl~ 97 (334)
T Consensus 3 ~e~iv~~L~nai~~~-----klsHAYLF~G~~G~Gk~~~a~~~a~~l~~~~~~~~~~~~~~~~~~~id~~~~~i~~~~i~ 77 (303)
T PRK07132 3 DNNIIKSLDNLAKQN-----KISHSFLLKSNYNNDLDESILYFLNKFNNLQSLNLNLEELPYNIFLFDIFDEDLSKEEFL 77 (303)
T ss_pred CHHHHHHHHHHHHCC-----CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHH
T ss_conf 038999999999849-----976168867899867999999999997299878887545653230413322200168899
Q ss_pred HHH-----HHH--HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCHHH
Q ss_conf 666-----641--0163788875761698999999998634751002567876520004667400552045543355454
Q gi|254780552|r 98 ALL-----TNL--EDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRVGLLTNPL 170 (334)
Q Consensus 98 ~~~-----~~~--~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~~l~~~l 170 (334)
T Consensus 78 ~~i~~~~~~~~~~~~~Kv~IIdea~~lt~~A~NaLLKtLEE----------Pp--------~~~~fil~t~~~~~il~TI 139 (303)
T PRK07132 78 SAIEKFSFSSFVSNQKKILIIKNIEKTSNSSLNALLKTIEE----------PS--------KNTYFLLTTKNINKVIPTI 139 (303)
T ss_pred HHHHHHHHCCCCCCCEEEEEEECHHHCCHHHHHHHHHHCCC----------CC--------CCEEEEEEECCHHHCCHHH
T ss_conf 99999973665568706999816553399999999987038----------98--------6848999728824383778
Q ss_pred HHCCCCEEECCCCCHHHHHHHHHH
Q ss_conf 420120673264547999998777
Q gi|254780552|r 171 QDRFGIPIRLNFYEIEDLKTIVQR 194 (334)
Q Consensus 171 ~sR~~~~~~~~~~~~~el~~il~~ 194 (334)
T Consensus 140 ~SRCq-~~~f~~~~~~~i~~~l~e 162 (303)
T PRK07132 140 VSRCQ-VINVKEPDQQKILAKLLS 162 (303)
T ss_pred HHCCE-EEECCCCCHHHHHHHHHH
T ss_conf 63665-663788999999999986