HHsearch alignment for GI: 254780552 and conserved domain: PRK07270
>PRK07270 DNA polymerase III subunits gamma and tau; Validated.
Probab=100.00 E-value=2.8e-45 Score=297.17 Aligned_cols=211 Identities=23% Similarity=0.319 Sum_probs=170.7
Q ss_pred HHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCE-EEECCCCCCHHHHHHHHHHHCCCCCC------------
Q ss_conf 57875078987782397999999999999866146776707-99737885577899999986189853------------
Q gi|254780552|r 17 ADISLLRPRTLEEFTGQVEACSNLKVFIEAAKARAEALDHV-LFVGPPGLGKTTLAQVVARELGVNFR------------ 83 (334)
Q Consensus 17 ~~~~~lRP~~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~-Lf~GPpG~GKTtlA~iiA~~l~~~~~------------ 83 (334)
T Consensus 4 aLyrkyRP~~F~dvvGQe~i~~~L~nal~~~r-----i~HAyLF~GP~GtGKts~ArifAkaLnC~~~~~~~pC~~C~~C 78 (557)
T PRK07270 4 ALYRKYRSQTFDEMVGQEVVATTLKQAVESGK-----ISHAYLFSGPRGTGKTSAAKIFAKAMNCPNQVDGEPCNNCDIC 78 (557)
T ss_pred HHHHHHCCCCHHHHCCHHHHHHHHHHHHHCCC-----CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf 76766089987671481999999999998599-----5404421089986899999999999579998999988877799
Q ss_pred ------------CCCCCCCCCHHHHHHHHHHH------HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf ------------12576443346766666641------016378887576169899999999863475100256787652
Q gi|254780552|r 84 ------------STSGPVIAKAGDLAALLTNL------EDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSAR 145 (334)
Q Consensus 84 ------------~~s~~~~~~~~dl~~~~~~~------~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~ 145 (334)
T Consensus 79 ~~i~~g~~~DviEidaas~~gVd~IRei~~~~~~~P~~~~yKV~IIDEah~Ls~~A~NALLKtLEE----------PP-- 146 (557)
T PRK07270 79 RDITNGSLEDVIEIDAASNNGVDEIRDIRDKSTYAPSRATYKVYIIDEVHMLSTGAFNALLKTLEE----------PT-- 146 (557)
T ss_pred HHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHC----------CC--
T ss_conf 998758999748734777678899999999842387778838999714453499999989998528----------99--
Q ss_pred EEECCCCCCEEEECCCCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 00046674005520455433554544201206732645479999987776541210111111123320221015678877
Q gi|254780552|r 146 SVKINLSRFTLIAATTRVGLLTNPLQDRFGIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRL 225 (334)
Q Consensus 146 ~~~~~~~~f~lI~ATt~~~~l~~~l~sR~~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~Alnl 225 (334)
T Consensus 147 ------~~~vFIL~Ttep~kIl~TI~SRCQ-rf~F~~i~~~~i~~~L~~I~~~E~i~~~~~aL~~Ia~~a~G~mRdAlsi 219 (557)
T PRK07270 147 ------ENVVFILATTELHKIPATILSRVQ-RFEFKSIKTKAIREHLAWILDKEGISFEVEALNLIARRAEGGMRDALSI 219 (557)
T ss_pred ------CCEEEEEEECCHHHCCHHHHHHHH-HCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHH
T ss_conf ------876999984994759288874300-0108889999999999999998399869999999999779968789999
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 75433345541588642778787654210
Q gi|254780552|r 226 LRRVRDFAEVAHAKTITREIADAALLRLA 254 (334)
Q Consensus 226 Le~v~d~a~~~~~~~i~~~~~~~~l~~~~ 254 (334)
T Consensus 220 LdQ~~s~---~~~~~it~~~v~~~~G~~~ 245 (557)
T PRK07270 220 LDQALSL---SQDNQVTIAIAEEITGSIS 245 (557)
T ss_pred HHHHHHC---CCCCCCCHHHHHHHHCCCC
T ss_conf 9999971---7999767999999968998