HHsearch alignment for GI: 254780552 and conserved domain: PRK07952
>PRK07952 DNA replication protein DnaC; Validated.
Probab=98.99 E-value=6.3e-10 Score=80.24 Aligned_cols=104 Identities=29% Similarity=0.438 Sum_probs=63.0
Q ss_pred CHHHH----CCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC---CCCCCCCCCCCC-CCHHH--
Q ss_conf 87782----397999999999999866146776707997378855778999999861---898531257644-33467--
Q gi|254780552|r 26 TLEEF----TGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVAREL---GVNFRSTSGPVI-AKAGD-- 95 (334)
Q Consensus 26 ~l~dv----iGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l---~~~~~~~s~~~~-~~~~d-- 95 (334)
T Consensus 67 ~Feny~~~~~~q~~al~~a~~y~enf~---~~~~gLlF~G~~GTGKThLA~aIan~Li~~G~sVlf~t~~dLl~~lr~t~ 143 (242)
T PRK07952 67 SFENYRVECEGQMNALSKARQYVEEFD---GNIASFIFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIMSAMKDTF 143 (242)
T ss_pred EEECEECCCHHHHHHHHHHHHHHHHHC---CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHH
T ss_conf 421201587778999999999998654---38871799789999789999999999998799499977999999999998
Q ss_pred ------HHHHHHHHHCCCHHHHHHHH--HCCHHHHHHHHHHHHCC
Q ss_conf ------66666641016378887576--16989999999986347
Q gi|254780552|r 96 ------LAALLTNLEDRDVLFIDEIH--RLSIIVEEILYPAMEDF 132 (334)
Q Consensus 96 ------l~~~~~~~~~~~vlfiDEih--rl~~~~q~~Ll~~mE~~ 132 (334)
T Consensus 144 ~~~~~~e~~~l~~l~~~dLLIiDdlG~e~~t~~~~~~lf~iId~R 188 (242)
T PRK07952 144 RNSETSEEQLLNDLSNVDLLVIDEIGVQTESRYEKVIINQIVDRR 188 (242)
T ss_pred HCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf 068756999999863189898730146658888999999999999