HHsearch alignment for GI: 254780552 and conserved domain: PRK07993
>PRK07993 DNA polymerase III subunit delta'; Validated.
Probab=99.68 E-value=5.9e-16 Score=117.07 Aligned_cols=150 Identities=21% Similarity=0.226 Sum_probs=109.0
Q ss_pred CCCE-EEECCCCCCHHHHHHHHHHHCCCCCCC-------------CC-C--CCC-----------CCHHHHHHHHHHH--
Q ss_conf 6707-997378855778999999861898531-------------25-7--644-----------3346766666641--
Q gi|254780552|r 54 LDHV-LFVGPPGLGKTTLAQVVARELGVNFRS-------------TS-G--PVI-----------AKAGDLAALLTNL-- 103 (334)
Q Consensus 54 ~~h~-Lf~GPpG~GKTtlA~iiA~~l~~~~~~-------------~s-~--~~~-----------~~~~dl~~~~~~~-- 103 (334)
T Consensus 23 l~HA~L~~G~~G~Gk~~la~~~a~~llC~~~~~~~~Cg~C~~C~l~~~~~HPD~~~i~pe~~~~~I~IdqIR~l~~~~~~ 102 (334)
T PRK07993 23 GHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLTPEKGKSSLGVDAVREVTEKLYE 102 (334)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 10467547999988999999999998189999999999997899986689998477534223455999999999999843
Q ss_pred ----HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCHHHHHCCCCEEE
Q ss_conf ----0163788875761698999999998634751002567876520004667400552045543355454420120673
Q gi|254780552|r 104 ----EDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRVGLLTNPLQDRFGIPIR 179 (334)
Q Consensus 104 ----~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~~l~~~l~sR~~~~~~ 179 (334)
T Consensus 103 ~~~~g~~kV~iI~~Ae~mn~~AaNaLLKtLEE----------Pp~--------~t~~iL~t~~~~~lLpTI~SRCq-~~~ 163 (334)
T PRK07993 103 HARLGGAKVVWLPDAALLTDAAANALLKTLEE----------PPE--------KTWFFLACREPARLLATLRSRCR-LHY 163 (334)
T ss_pred CCCCCCCEEEEECCHHHHCHHHHHHHHHHHCC----------CCC--------CEEEEEECCCHHHCCCHHHHHCC-CCC
T ss_conf 66569947999766777599999999986127----------998--------84999866985657238875230-415
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 264547999998777654121011111112332022101567887775
Q gi|254780552|r 180 LNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRLLR 227 (334)
Q Consensus 180 ~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~AlnlLe 227 (334)
T Consensus 164 ~~~~~~~~~~~wL~~~-----~~~~~~~~~~al~la~Gspl~A~~l~~ 206 (334)
T PRK07993 164 LAPPPEQYALTWLSRE-----VTMSQEALLAALRLSAGAPGAALALLQ 206 (334)
T ss_pred CCCCCHHHHHHHHHHH-----CCCCHHHHHHHHHHCCCCHHHHHHHHC
T ss_conf 8997999999999873-----689889999999984998999999825