HHsearch alignment for GI: 254780552 and conserved domain: PRK07994

>PRK07994 DNA polymerase III subunits gamma and tau; Validated.
Probab=100.00  E-value=0  Score=301.87  Aligned_cols=210  Identities=23%  Similarity=0.282  Sum_probs=178.3

Q ss_pred             HHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCE-EEECCCCCCHHHHHHHHHHHCCCCCC------------
Q ss_conf             57875078987782397999999999999866146776707-99737885577899999986189853------------
Q gi|254780552|r   17 ADISLLRPRTLEEFTGQVEACSNLKVFIEAAKARAEALDHV-LFVGPPGLGKTTLAQVVARELGVNFR------------   83 (334)
Q Consensus        17 ~~~~~lRP~~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~-Lf~GPpG~GKTtlA~iiA~~l~~~~~------------   83 (334)
T Consensus         5 ~lark~Rp~~f~~~vGQ~~v~~~l~na~~~~r-----~~haylf~G~rG~GKtt~ari~ak~lnc~~~~~~~pcg~c~~c   79 (643)
T PRK07994          5 VLARKWRPQTFADVVGQEHVLTALANGLSLGR-----IHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNC   79 (643)
T ss_pred             HHHHHHCCCCHHHHCCCHHHHHHHHHHHHHCC-----CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf             77765288866665387999999999998298-----6634874589988888999999999679999999978767768


Q ss_pred             ------------CCCCCCCCCHHHHHHHHHHHH------CCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             ------------125764433467666666410------16378887576169899999999863475100256787652
Q gi|254780552|r   84 ------------STSGPVIAKAGDLAALLTNLE------DRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSAR  145 (334)
Q Consensus        84 ------------~~s~~~~~~~~dl~~~~~~~~------~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~  145 (334)
T Consensus        80 ~~i~~g~~~d~~eidaas~~~vd~~rel~~~~~y~p~~~r~kvyiidEvhmls~~afnalLKtlEe--------------  145 (643)
T PRK07994         80 REIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEE--------------  145 (643)
T ss_pred             HHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECHHHCCHHHHHHHHHHHCC--------------
T ss_conf             988658988758863677788899999998446688778536999722101589999999986237--------------


Q ss_pred             EEECCCCCCEEEECCCCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf             00046674005520455433554544201206732645479999987776541210111111123320221015678877
Q gi|254780552|r  146 SVKINLSRFTLIAATTRVGLLTNPLQDRFGIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRL  225 (334)
Q Consensus       146 ~~~~~~~~f~lI~ATt~~~~l~~~l~sR~~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~Alnl  225 (334)
T Consensus       146 ----Pp~hv~filaTT~~~k~p~TilSRC~-~f~~~~~~~~~i~~~l~~i~~~e~i~~~~~al~~ia~~a~gs~rdalsl  220 (643)
T PRK07994        146 ----PPAHVKFLLATTDPQKLPVTILSRCL-QFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAADGSLRDALSL  220 (643)
T ss_pred             ----CCHHCEEEEECCCHHHCCHHHHHHHH-HEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHH
T ss_conf             ----86100899860774548478997776-5001669999999999999997599878899999999747865668889


Q ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf             75433345541588642778787654210
Q gi|254780552|r  226 LRRVRDFAEVAHAKTITREIADAALLRLA  254 (334)
Q Consensus       226 Le~v~d~a~~~~~~~i~~~~~~~~l~~~~  254 (334)
T Consensus       221 ~dq----~i~~~~~~~~~~~v~~mlg~~d  245 (643)
T PRK07994        221 TDQ----AIASGDGQVSTQAVSAMLGTLD  245 (643)
T ss_pred             HHH----HHHHCCCCCCHHHHHHHHCCCC
T ss_conf             999----9986589747999999858998