HHsearch alignment for GI: 254780552 and conserved domain: PRK07994
>PRK07994 DNA polymerase III subunits gamma and tau; Validated.
Probab=100.00 E-value=0 Score=301.87 Aligned_cols=210 Identities=23% Similarity=0.282 Sum_probs=178.3
Q ss_pred HHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCE-EEECCCCCCHHHHHHHHHHHCCCCCC------------
Q ss_conf 57875078987782397999999999999866146776707-99737885577899999986189853------------
Q gi|254780552|r 17 ADISLLRPRTLEEFTGQVEACSNLKVFIEAAKARAEALDHV-LFVGPPGLGKTTLAQVVARELGVNFR------------ 83 (334)
Q Consensus 17 ~~~~~lRP~~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~-Lf~GPpG~GKTtlA~iiA~~l~~~~~------------ 83 (334)
T Consensus 5 ~lark~Rp~~f~~~vGQ~~v~~~l~na~~~~r-----~~haylf~G~rG~GKtt~ari~ak~lnc~~~~~~~pcg~c~~c 79 (643)
T PRK07994 5 VLARKWRPQTFADVVGQEHVLTALANGLSLGR-----IHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNC 79 (643)
T ss_pred HHHHHHCCCCHHHHCCCHHHHHHHHHHHHHCC-----CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf 77765288866665387999999999998298-----6634874589988888999999999679999999978767768
Q ss_pred ------------CCCCCCCCCHHHHHHHHHHHH------CCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf ------------125764433467666666410------16378887576169899999999863475100256787652
Q gi|254780552|r 84 ------------STSGPVIAKAGDLAALLTNLE------DRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSAR 145 (334)
Q Consensus 84 ------------~~s~~~~~~~~dl~~~~~~~~------~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~ 145 (334)
T Consensus 80 ~~i~~g~~~d~~eidaas~~~vd~~rel~~~~~y~p~~~r~kvyiidEvhmls~~afnalLKtlEe-------------- 145 (643)
T PRK07994 80 REIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEE-------------- 145 (643)
T ss_pred HHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECHHHCCHHHHHHHHHHHCC--------------
T ss_conf 988658988758863677788899999998446688778536999722101589999999986237--------------
Q ss_pred EEECCCCCCEEEECCCCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 00046674005520455433554544201206732645479999987776541210111111123320221015678877
Q gi|254780552|r 146 SVKINLSRFTLIAATTRVGLLTNPLQDRFGIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRL 225 (334)
Q Consensus 146 ~~~~~~~~f~lI~ATt~~~~l~~~l~sR~~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~Alnl 225 (334)
T Consensus 146 ----Pp~hv~filaTT~~~k~p~TilSRC~-~f~~~~~~~~~i~~~l~~i~~~e~i~~~~~al~~ia~~a~gs~rdalsl 220 (643)
T PRK07994 146 ----PPAHVKFLLATTDPQKLPVTILSRCL-QFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAADGSLRDALSL 220 (643)
T ss_pred ----CCHHCEEEEECCCHHHCCHHHHHHHH-HEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHH
T ss_conf ----86100899860774548478997776-5001669999999999999997599878899999999747865668889
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 75433345541588642778787654210
Q gi|254780552|r 226 LRRVRDFAEVAHAKTITREIADAALLRLA 254 (334)
Q Consensus 226 Le~v~d~a~~~~~~~i~~~~~~~~l~~~~ 254 (334)
T Consensus 221 ~dq----~i~~~~~~~~~~~v~~mlg~~d 245 (643)
T PRK07994 221 TDQ----AIASGDGQVSTQAVSAMLGTLD 245 (643)
T ss_pred HHH----HHHHCCCCCCHHHHHHHHCCCC
T ss_conf 999----9986589747999999858998