HHsearch alignment for GI: 254780552 and conserved domain: PRK08118
>PRK08118 topology modulation protein; Reviewed.
Probab=97.35 E-value=0.00018 Score=46.78 Aligned_cols=31 Identities=26% Similarity=0.558 Sum_probs=27.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 7997378855778999999861898531257
Q gi|254780552|r 57 VLFVGPPGLGKTTLAQVVARELGVNFRSTSG 87 (334)
Q Consensus 57 ~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~ 87 (334)
T Consensus 4 I~IiG~~GsGKSTlAr~L~~~~~ip~~~LD~ 34 (167)
T PRK08118 4 IILIGSGGSGKSTLARQLGEKLNIPVHHLDA 34 (167)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEECCC
T ss_conf 9998899987999999999988969796443