HHsearch alignment for GI: 254780552 and conserved domain: PRK08699
>PRK08699 DNA polymerase III subunit delta'; Validated.
Probab=99.57 E-value=2e-14 Score=107.79 Aligned_cols=123 Identities=19% Similarity=0.292 Sum_probs=88.8
Q ss_pred CCCCE-EEECCCCCCHHHHHHHHHHHCCCCC--------C------CC---CCCCC------------------CCHHHH
Q ss_conf 76707-9973788557789999998618985--------3------12---57644------------------334676
Q gi|254780552|r 53 ALDHV-LFVGPPGLGKTTLAQVVARELGVNF--------R------ST---SGPVI------------------AKAGDL 96 (334)
Q Consensus 53 ~~~h~-Lf~GPpG~GKTtlA~iiA~~l~~~~--------~------~~---s~~~~------------------~~~~dl 96 (334)
T Consensus 19 rl~HA~L~~Gp~G~Gk~~~A~~~A~~llC~~~~~~~~~Cg~C~sC~~~~~g~HPD~~~i~p~~~~~~~g~~~~~I~idqi 98 (325)
T PRK08699 19 RRPNAWLFVGKKGTGKTAFARFAAKALLCETPAPGCKPCGECMSCHLFGQGSHPDFYEITPLADEPENGRKLLQIKIDAV 98 (325)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHH
T ss_conf 50117975799997899999999999828999888998988888999865999996885134453001665566769999
Q ss_pred HHHHHHH------HCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCHHH
Q ss_conf 6666641------0163788875761698999999998634751002567876520004667400552045543355454
Q gi|254780552|r 97 AALLTNL------EDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRVGLLTNPL 170 (334)
Q Consensus 97 ~~~~~~~------~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~~l~~~l 170 (334)
T Consensus 99 R~l~~~~~~~~~~~~~kV~ii~~ae~mn~~aaNaLLK~LEE----------Pp--------~~~~fiL~t~~~~~llpTI 160 (325)
T PRK08699 99 REIIDNVYLTSVRGGLRVILIHPAESMNVQAANSLLKVLEE----------PP--------PQVVFLLVSHAADKVLPTI 160 (325)
T ss_pred HHHHHHHCCCCCCCCCEEEEECCHHHHCHHHHHHHHHHHCC----------CC--------CCEEEEEEECCHHHCCCHH
T ss_conf 99999971086568946999857777589999999998417----------88--------8848999879846462339
Q ss_pred HHCCCCEEECCCCCHHHHHHHHHH
Q ss_conf 420120673264547999998777
Q gi|254780552|r 171 QDRFGIPIRLNFYEIEDLKTIVQR 194 (334)
Q Consensus 171 ~sR~~~~~~~~~~~~~el~~il~~ 194 (334)
T Consensus 161 ~SRc~-~~~~~~p~~~~~~~~L~~ 183 (325)
T PRK08699 161 KSRCR-KMVLPAPSHEEALAYLRE 183 (325)
T ss_pred HHCCC-CCCCCCCCHHHHHHHHHH
T ss_conf 86454-210899599999999997