HHsearch alignment for GI: 254780552 and conserved domain: PRK08903

>PRK08903 hypothetical protein; Validated.
Probab=99.71  E-value=3.8e-16  Score=118.27  Aligned_cols=196  Identities=17%  Similarity=0.215  Sum_probs=135.9

Q ss_pred             CCHHHHCC--HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCC---CCCCCCCCCCCCCHHHHHHH
Q ss_conf             98778239--79999999999998661467767079973788557789999998618---98531257644334676666
Q gi|254780552|r   25 RTLEEFTG--QVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVARELG---VNFRSTSGPVIAKAGDLAAL   99 (334)
Q Consensus        25 ~~l~dviG--Q~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~---~~~~~~s~~~~~~~~dl~~~   99 (334)
T Consensus        15 ~tfdnFv~g~n~~~~~~l~~~~~~----~~~~~~l~i~G~~G~GKTHLl~a~~~~~~~~~~~~~yl~~~~------~~~~   84 (227)
T PRK08903         15 PTFDNFIAGENAELVTRLRELAAG----PVADRFFYLWGEAGSGRSHLLQALVAAASEGGKNARYLDPAS------PLLA   84 (227)
T ss_pred             CCHHCCCCCCHHHHHHHHHHHHHC----CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCC------CHHH
T ss_conf             764315577759999999988743----887866999899999888999999999980699749965110------4577


Q ss_pred             HHHHHCCCHHHHHHHHHCCHHHHHHHHHHHH----CCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCC---CCHHHHH
Q ss_conf             6641016378887576169899999999863----47510025678765200046674005520455433---5545442
Q gi|254780552|r  100 LTNLEDRDVLFIDEIHRLSIIVEEILYPAME----DFQLDLMVGEGPSARSVKINLSRFTLIAATTRVGL---LTNPLQD  172 (334)
Q Consensus       100 ~~~~~~~~vlfiDEihrl~~~~q~~Ll~~mE----~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~~---l~~~l~s  172 (334)
T Consensus        85 ~~~~~~~d~l~iDDi~~i~~~~q~~lF~l~N~~~~~~~~--------------------~ll~s~~~~p~~l~~~~DL~S  144 (227)
T PRK08903         85 FDFDPRAELYAVDDVERLDDAQQIALFNLFNRVRAHGKT--------------------ALLVAGPAAPLALDVREDLRT  144 (227)
T ss_pred             HHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC--------------------EEEECCCCCHHHCCCCHHHHH
T ss_conf             742001898999641148956999999999999972994--------------------899718997120120089999


Q ss_pred             CC--CCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf             01--2067326454799999877765412101111111233202210156788777543334554158864277878765
Q gi|254780552|r  173 RF--GIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRLLRRVRDFAEVAHAKTITREIADAAL  250 (334)
Q Consensus       173 R~--~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~AlnlLe~v~d~a~~~~~~~i~~~~~~~~l  250 (334)
T Consensus       145 Rl~~gl~~~i~~pdde~~~~iL~~~a~~rgl~l~~~v~~yl~~r~~R~~~~L~~~l~~Ld~~-sl~~kr~iTi~lvkevL  223 (227)
T PRK08903        145 RLGWGLVYEVKPLSDEDKIAALKAAAAERGLQLADEVPDYLLTHFRRDMPSLMALLDALDRY-SLEQKRAVTLPLLREML  223 (227)
T ss_pred             HHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH-HHHCCCCCCHHHHHHHH
T ss_conf             99389738997979999999999999962999988999999998347899999999999999-99829999999999985


Q ss_pred             H
Q ss_conf             4
Q gi|254780552|r  251 L  251 (334)
Q Consensus       251 ~  251 (334)
T Consensus       224 a  224 (227)
T PRK08903        224 A  224 (227)
T ss_pred             C
T ss_conf             5