HHsearch alignment for GI: 254780552 and conserved domain: PRK08903
>PRK08903 hypothetical protein; Validated.
Probab=99.71 E-value=3.8e-16 Score=118.27 Aligned_cols=196 Identities=17% Similarity=0.215 Sum_probs=135.9
Q ss_pred CCHHHHCC--HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCC---CCCCCCCCCCCCCHHHHHHH
Q ss_conf 98778239--79999999999998661467767079973788557789999998618---98531257644334676666
Q gi|254780552|r 25 RTLEEFTG--QVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVARELG---VNFRSTSGPVIAKAGDLAAL 99 (334)
Q Consensus 25 ~~l~dviG--Q~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~---~~~~~~s~~~~~~~~dl~~~ 99 (334)
T Consensus 15 ~tfdnFv~g~n~~~~~~l~~~~~~----~~~~~~l~i~G~~G~GKTHLl~a~~~~~~~~~~~~~yl~~~~------~~~~ 84 (227)
T PRK08903 15 PTFDNFIAGENAELVTRLRELAAG----PVADRFFYLWGEAGSGRSHLLQALVAAASEGGKNARYLDPAS------PLLA 84 (227)
T ss_pred CCHHCCCCCCHHHHHHHHHHHHHC----CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCC------CHHH
T ss_conf 764315577759999999988743----887866999899999888999999999980699749965110------4577
Q ss_pred HHHHHCCCHHHHHHHHHCCHHHHHHHHHHHH----CCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCC---CCHHHHH
Q ss_conf 6641016378887576169899999999863----47510025678765200046674005520455433---5545442
Q gi|254780552|r 100 LTNLEDRDVLFIDEIHRLSIIVEEILYPAME----DFQLDLMVGEGPSARSVKINLSRFTLIAATTRVGL---LTNPLQD 172 (334)
Q Consensus 100 ~~~~~~~~vlfiDEihrl~~~~q~~Ll~~mE----~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~~---l~~~l~s 172 (334)
T Consensus 85 ~~~~~~~d~l~iDDi~~i~~~~q~~lF~l~N~~~~~~~~--------------------~ll~s~~~~p~~l~~~~DL~S 144 (227)
T PRK08903 85 FDFDPRAELYAVDDVERLDDAQQIALFNLFNRVRAHGKT--------------------ALLVAGPAAPLALDVREDLRT 144 (227)
T ss_pred HHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC--------------------EEEECCCCCHHHCCCCHHHHH
T ss_conf 742001898999641148956999999999999972994--------------------899718997120120089999
Q ss_pred CC--CCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 01--2067326454799999877765412101111111233202210156788777543334554158864277878765
Q gi|254780552|r 173 RF--GIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRLLRRVRDFAEVAHAKTITREIADAAL 250 (334)
Q Consensus 173 R~--~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~AlnlLe~v~d~a~~~~~~~i~~~~~~~~l 250 (334)
T Consensus 145 Rl~~gl~~~i~~pdde~~~~iL~~~a~~rgl~l~~~v~~yl~~r~~R~~~~L~~~l~~Ld~~-sl~~kr~iTi~lvkevL 223 (227)
T PRK08903 145 RLGWGLVYEVKPLSDEDKIAALKAAAAERGLQLADEVPDYLLTHFRRDMPSLMALLDALDRY-SLEQKRAVTLPLLREML 223 (227)
T ss_pred HHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH-HHHCCCCCCHHHHHHHH
T ss_conf 99389738997979999999999999962999988999999998347899999999999999-99829999999999985
Q ss_pred H
Q ss_conf 4
Q gi|254780552|r 251 L 251 (334)
Q Consensus 251 ~ 251 (334)
T Consensus 224 a 224 (227)
T PRK08903 224 A 224 (227)
T ss_pred C
T ss_conf 5