HHsearch alignment for GI: 254780552 and conserved domain: PRK09087

Probab=99.47  E-value=7.8e-13  Score=98.00  Aligned_cols=198  Identities=17%  Similarity=0.180  Sum_probs=130.7

Q ss_pred             CCHHHH-CCH--HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             987782-397--99999999999986614677670799737885577899999986189853125764433467666666
Q gi|254780552|r   25 RTLEEF-TGQ--VEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVARELGVNFRSTSGPVIAKAGDLAALLT  101 (334)
Q Consensus        25 ~~l~dv-iGQ--~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~~~~~~~~dl~~~~~  101 (334)
T Consensus        18 ~~~dnF~vs~~N~~a~~~l~~~----~--~w~~~~~~L~Gp~gsGKTHL~~~~~~~~~a~~~~~~--~~~--~~~~---~   84 (226)
T PRK09087         18 YGRDDLVVTESNRAAVSLVDRW----P--NWPSPVVVLAGPVGSGKTHLASIWREKADALLVHPN--EIG--SDAA---N   84 (226)
T ss_pred             CCCCCEEECCCHHHHHHHHHHC----C--CCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEECHH--HCC--HHHH---H
T ss_conf             8733647757699999999847----2--677775899899999886999999998099683668--747--4667---6


Q ss_pred             HHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCC---CHHHHHCCC--C
Q ss_conf             41016378887576169899999999863475100256787652000466740055204554335---545442012--0
Q gi|254780552|r  102 NLEDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRVGLL---TNPLQDRFG--I  176 (334)
Q Consensus       102 ~~~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~~l---~~~l~sR~~--~  176 (334)
T Consensus        85 ~~~~~-~~~idd~d~~~~-dEe~LFhl~N~~~-----~~-----------~~~LLlts~~~p~~l~~~L~DL~SRL~~~~  146 (226)
T PRK09087         85 AAAER-PVLIEDIDAGGF-DETGLFHLINSVR-----QA-----------GTSLLMTSRLWPSAWNVKLPDLKSRLKAAT  146 (226)
T ss_pred             HHCCC-CEEEECCCCCCC-CHHHHHHHHHHHH-----HC-----------CCEEEEECCCCHHHCCCCCHHHHHHHHCCE
T ss_conf             53279-889974877774-7899999999998-----53-----------987999889895666762468999985785


Q ss_pred             EEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf             673264547999998777654121011111112332022101567887775433345541588642778787654210
Q gi|254780552|r  177 PIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRLLRRVRDFAEVAHAKTITREIADAALLRLA  254 (334)
Q Consensus       177 ~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~AlnlLe~v~d~a~~~~~~~i~~~~~~~~l~~~~  254 (334)
T Consensus       147 ~~~I~~pdD~ll~~~L~k~~~~r~l~l~~~v~~yll~r~~Rs~~~l~~~l~~L-D~~SL~~kr~ITiplikevL~~l~  223 (226)
T PRK09087        147 VVEIGEPDDALLSGVIFKLFADRQLYVEPHVVYYLVSRMERSLFAAQTIVERL-DRLALERKSRITRALAAEVLNEMG  223 (226)
T ss_pred             EEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH-HHHHHHCCCCCCHHHHHHHHHHHC
T ss_conf             79835999899999999998757657888899999984588999999999999-999998189998999999998511