HHsearch alignment for GI: 254780552 and conserved domain: PRK09183

Probab=98.42  E-value=1.7e-07  Score=65.35  Aligned_cols=78  Identities=27%  Similarity=0.473  Sum_probs=49.2

Q ss_pred             CCEEEECCCCCCHHHHHHHHHHHC---CCCCCCCCCCCCC----CH---HHHHHHHH-HHHCCCHHHHHHHH--HCCHHH
Q ss_conf             707997378855778999999861---8985312576443----34---67666666-41016378887576--169899
Q gi|254780552|r   55 DHVLFVGPPGLGKTTLAQVVAREL---GVNFRSTSGPVIA----KA---GDLAALLT-NLEDRDVLFIDEIH--RLSIIV  121 (334)
Q Consensus        55 ~h~Lf~GPpG~GKTtlA~iiA~~l---~~~~~~~s~~~~~----~~---~dl~~~~~-~~~~~~vlfiDEih--rl~~~~  121 (334)
T Consensus       102 ~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~~L~~~L~~a~~~~~~~~~l~r~l~~~dLLIiDdlG~~~~~~~~  181 (258)
T PRK09183        102 ENIVLLGPSGVGKTHLAIALGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAPRLLIIDEIGYLPFSQEE  181 (258)
T ss_pred             CCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEHHHHCCCCCHHH
T ss_conf             86799899998689999999999998799399978999999999998768599999987434651443133154688889


Q ss_pred             HHHHHHHHHCC
Q ss_conf             99999986347
Q gi|254780552|r  122 EEILYPAMEDF  132 (334)
Q Consensus       122 q~~Ll~~mE~~  132 (334)
T Consensus       182 ~~~lfeli~~R  192 (258)
T PRK09183        182 ANLFFQVIAKR  192 (258)
T ss_pred             HHHHHHHHHHH
T ss_conf             99999999998