HHsearch alignment for GI: 254780552 and conserved domain: PRK09302

>PRK09302 circadian clock protein KaiC; Reviewed.
Probab=96.68  E-value=0.0015  Score=41.14  Aligned_cols=20  Identities=35%  Similarity=0.426  Sum_probs=16.8

Q ss_pred             CEEEECCCCCCHHHHHHHHH
Q ss_conf             07997378855778999999
Q gi|254780552|r   56 HVLFVGPPGLGKTTLAQVVA   75 (334)
Q Consensus        56 h~Lf~GPpG~GKTtlA~iiA   75 (334)
T Consensus        26 ~~LV~G~pGsGKTtla~QfL   45 (501)
T PRK09302         26 PTLVSGTAGTGKTLFALQFL   45 (501)
T ss_pred             EEEEEECCCCCHHHHHHHHH
T ss_conf             79998389999999999999