HHsearch alignment for GI: 254780552 and conserved domain: PRK09302

>PRK09302 circadian clock protein KaiC; Reviewed.

Probab=96.11  E-value=0.0035  Score=39.00  Aligned_cols=22  Identities=36%  Similarity=0.498  Sum_probs=18.4

Q ss_pred             CEEEECCCCCCHHHHHHHHHHH
Q ss_conf             0799737885577899999986
Q gi|254780552|r   56 HVLFVGPPGLGKTTLAQVVARE   77 (334)
Q Consensus        56 h~Lf~GPpG~GKTtlA~iiA~~   77 (334)
T Consensus       268 stLi~Gp~GtGKTtla~qFl~~  289 (501)
T PRK09302        268 IILVSGATGTGKTLLVSKFAEA  289 (501)
T ss_pred             EEEEECCCCCCHHHHHHHHHHH
T ss_conf             6999889998889999999999