HHsearch alignment for GI: 254780552 and conserved domain: PRK10923
>PRK10923 glnG nitrogen regulation protein NR(I); Provisional.
Probab=99.62 E-value=7.8e-14 Score=104.12 Aligned_cols=207 Identities=21% Similarity=0.253 Sum_probs=127.2
Q ss_pred CHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC---CCCCCCCCCCCCCCH---HHH---
Q ss_conf 87782397999999999999866146776707997378855778999999861---898531257644334---676---
Q gi|254780552|r 26 TLEEFTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVAREL---GVNFRSTSGPVIAKA---GDL--- 96 (334)
Q Consensus 26 ~l~dviGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l---~~~~~~~s~~~~~~~---~dl--- 96 (334)
T Consensus 136 ~~~~liG~S~~m~~v~~~i~~~a~---~~~pVLI~GE~GTGK~~~Ar~IH~~S~r~~~pfi~vnC~~~~~~~~e~eLFG~ 212 (469)
T PRK10923 136 PTTDIIGEAPAMQDVFRIIGRLSR---SSISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGH 212 (469)
T ss_pred CCCCCEECCHHHHHHHHHHHHHHC---CCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHCC
T ss_conf 755654689999999999999858---89978998989826999999999748877999578767889977899997087
Q ss_pred ------------HHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCC
Q ss_conf ------------66666410163788875761698999999998634751002567876520004667400552045543
Q gi|254780552|r 97 ------------AALLTNLEDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRVG 164 (334)
Q Consensus 97 ------------~~~~~~~~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~ 164 (334)
T Consensus 213 ~~gaf~ga~~~~~g~~e~a~-~GTLfLdeI~~L~~~~Q~kLl~~L~~~~~~~~-g~---~~~~~---~d~RiIaat~~~L 284 (469)
T PRK10923 213 EKGAFTGANTIRQGRFEQAD-GGTLFLDEIGDMPLDVQTRLLRVLADGQFYRV-GG---YAPVK---VDVRIIAATHQNL 284 (469)
T ss_pred CCCCCCCCCCCCCCCHHHCC-CCCEEHHHHHHCCHHHHHHHHHHHHCCCEEEC-CC---CCEEE---ECCEEEEECCCCH
T ss_conf 66787886424587366438-99265663664899999999999855937857-99---85122---1437997078799
Q ss_pred -------CCCHHHHHCCCC-EEECCCCC--HHHHHHH----HHHHHHHCC---CHHHHHHHHHHHCCC-CCCHHHHHHHH
Q ss_conf -------355454420120-67326454--7999998----777654121---011111112332022-10156788777
Q gi|254780552|r 165 -------LLTNPLQDRFGI-PIRLNFYE--IEDLKTI----VQRGAKLTG---LAVTDEAACEIAMRS-RGTPRIAGRLL 226 (334)
Q Consensus 165 -------~l~~~l~sR~~~-~~~~~~~~--~~el~~i----l~~~~~~~~---i~~~~~al~~ia~~s-~Gd~R~AlnlL 226 (334)
T Consensus 285 ~~~v~~g~Fr~dLyyrL~~~~I~lPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~~s~~a~~~L~~y~WPGNvrEL~n~i 364 (469)
T PRK10923 285 EQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTC 364 (469)
T ss_pred HHHHHHCCHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 99866081779999864424015846544653499999999999999859997878999999997499998799999999
Q ss_pred HHHHHHHHHHCCCCCCHHHH
Q ss_conf 54333455415886427787
Q gi|254780552|r 227 RRVRDFAEVAHAKTITREIA 246 (334)
Q Consensus 227 e~v~d~a~~~~~~~i~~~~~ 246 (334)
T Consensus 365 er~~~~~---~~~~i~~~dl 381 (469)
T PRK10923 365 RWLTVMA---AGQEVLIQDL 381 (469)
T ss_pred HHHHHHC---CCCCCCHHHC
T ss_conf 9999857---9982547757