HHsearch alignment for GI: 254780552 and conserved domain: PRK11131

Probab=96.62  E-value=0.0025  Score=39.89  Aligned_cols=72  Identities=31%  Similarity=0.455  Sum_probs=39.2

Q ss_pred             EEEECCCCCCHHH-----------------------------HHHHHHHHCCCCCCCCCCCCC--C-CH-----------
Q ss_conf             7997378855778-----------------------------999999861898531257644--3-34-----------
Q gi|254780552|r   57 VLFVGPPGLGKTT-----------------------------LAQVVARELGVNFRSTSGPVI--A-KA-----------   93 (334)
Q Consensus        57 ~Lf~GPpG~GKTt-----------------------------lA~iiA~~l~~~~~~~s~~~~--~-~~-----------   93 (334)
T Consensus        92 vii~GeTGsGKTTQiPq~~le~g~g~~~~I~~TQPRRiAA~svA~RVA~E~~~~lG~~VGY~VRf~~~~s~~t~i~~~Td  171 (1295)
T PRK11131         92 VIVAGETGSGKTTQLPKICLELGRGIKGLIGHTQPRRLAARTVANRIAEELETELGGCVGYKVRFNDQVSDNTMVKLMTD  171 (1295)
T ss_pred             EEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEECC
T ss_conf             99976899987889999999627999998997796599999999999998199989988889456988799977999765


Q ss_pred             HHH-HHHHH--HHHCCCHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf             676-66666--4101637888757616989999999986
Q gi|254780552|r   94 GDL-AALLT--NLEDRDVLFIDEIHRLSIIVEEILYPAM  129 (334)
Q Consensus        94 ~dl-~~~~~--~~~~~~vlfiDEihrl~~~~q~~Ll~~m  129 (334)
T Consensus       172 GiLL~e~~~d~~L~~y~~iIiDEaHERsl~~-D~LLg~L  209 (1295)
T PRK11131        172 GILLAEIQQDRLLMQYDTIIIDEAHERSLNI-DFILGYL  209 (1295)
T ss_pred             HHHHHHHHHCCCCCCCCEEEEECCCCCCCHH-HHHHHHH
T ss_conf             6999986209987887779986855688019-9999999