HHsearch alignment for GI: 254780552 and conserved domain: PRK12723

Probab=97.75  E-value=6.1e-05  Score=49.73  Aligned_cols=64  Identities=30%  Similarity=0.441  Sum_probs=33.9

Q ss_pred             EEEECCCCCCHHHHHHHHHHHC--C-------CCCCCCCC------------------C--CCCCHHHHHHHHHHHHCCC
Q ss_conf             7997378855778999999861--8-------98531257------------------6--4433467666666410163
Q gi|254780552|r   57 VLFVGPPGLGKTTLAQVVAREL--G-------VNFRSTSG------------------P--VIAKAGDLAALLTNLEDRD  107 (334)
Q Consensus        57 ~Lf~GPpG~GKTtlA~iiA~~l--~-------~~~~~~s~------------------~--~~~~~~dl~~~~~~~~~~~  107 (334)
T Consensus       177 i~lVGPTGvGKTTTiAKLAa~~~l~~~~k~~~V~lit~DtyRigAveQLktya~il~vp~~v~~~~~dl~~~l~~~~~~D  256 (388)
T PRK12723        177 FILVGPTGVGKTTTIAKLAAIYGINSDDKSLNIKIITIDNYRIGAKKQIQTYGDIMGIPVKAIESFKDLKEEITQSKDFD  256 (388)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCC
T ss_conf             99989988757879999999999862676773799980787588999999999997880698578899999999724999


Q ss_pred             HHHHHHHHHCCHH
Q ss_conf             7888757616989
Q gi|254780552|r  108 VLFIDEIHRLSII  120 (334)
Q Consensus       108 vlfiDEihrl~~~  120 (334)
T Consensus       257 ~IlIDTAGrs~~d  269 (388)
T PRK12723        257 LVLIDTIGKSPKD  269 (388)
T ss_pred             EEEEECCCCCCCC
T ss_conf             9999589988568