HHsearch alignment for GI: 254780552 and conserved domain: PRK12724

Probab=97.47  E-value=7.9e-05  Score=49.05  Aligned_cols=64  Identities=27%  Similarity=0.447  Sum_probs=34.9

Q ss_pred             EEEECCCCCCHHH-HHHHHHHHC---CCCCCCCC--------------------CC--CCCCHHHHHHHHHHHHCCCHHH
Q ss_conf             7997378855778-999999861---89853125--------------------76--4433467666666410163788
Q gi|254780552|r   57 VLFVGPPGLGKTT-LAQVVAREL---GVNFRSTS--------------------GP--VIAKAGDLAALLTNLEDRDVLF  110 (334)
Q Consensus        57 ~Lf~GPpG~GKTt-lA~iiA~~l---~~~~~~~s--------------------~~--~~~~~~dl~~~~~~~~~~~vlf  110 (334)
T Consensus       226 i~lVGPTGVGKTTTiAKLAA~~~l~~~kkVaLIT~DTYRIgAvEQLktYa~Il~iPv~vv~~~~el~~al~~-~~~DlIL  304 (432)
T PRK12724        226 VFFVGPTGSGKTTSIAKLAAKYFLHMGKSVSLYTTDNYRIAAIEQLKRYADTMGMPFYPVKDIKKFKETLAR-DGSELIL  304 (432)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHH-CCCCEEE
T ss_conf             999899998889999999999999749927999526653779999999999859945995189999999985-6999999


Q ss_pred             HHHHHHCCHHH
Q ss_conf             87576169899
Q gi|254780552|r  111 IDEIHRLSIIV  121 (334)
Q Consensus       111 iDEihrl~~~~  121 (334)
T Consensus       305 IDTAGrS~rd~  315 (432)
T PRK12724        305 IDTAGYSHRNL  315 (432)
T ss_pred             EECCCCCCCCH
T ss_conf             92999897899