HHsearch alignment for GI: 254780552 and conserved domain: TIGR00017
>TIGR00017 cmk cytidylate kinase; InterPro: IPR003136 This family consists of cytidylate kinase (2.7.4.14 from EC), which catalyzes the phosphorylation of cytidine 5-monophosphate (dCMP) to cytidine 5 -diphosphate (dCDP) in the presence of ATP or GTP. UMP and dCMP can also act as acceptors .; GO: 0004127 cytidylate kinase activity, 0005524 ATP binding, 0006139 nucleobase nucleoside nucleotide and nucleic acid metabolic process.
Probab=96.00 E-value=0.0043 Score=38.45 Aligned_cols=29 Identities=38% Similarity=0.715 Sum_probs=24.9
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 79973788557789999998618985312
Q gi|254780552|r 57 VLFVGPPGLGKTTLAQVVARELGVNFRST 85 (334)
Q Consensus 57 ~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~ 85 (334)
T Consensus 5 IAIDGPs~aGKStvak~~A~~L~y~ylds 33 (223)
T TIGR00017 5 IAIDGPSGAGKSTVAKAVAEKLGYKYLDS 33 (223)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCEEECC
T ss_conf 76237764655789999998629502144