HHsearch alignment for GI: 254780552 and conserved domain: TIGR02782
>TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB; InterPro: IPR014149 This entry represents TrbB, a protein, which is encoded in the trb locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for plasmid conjugative transfer . TrbB is a homologue of the vir system VirB11 ATPase , and the Flp pilus system ATPase TadA ..
Probab=97.01 E-value=0.0013 Score=41.65 Aligned_cols=46 Identities=35% Similarity=0.490 Sum_probs=32.6
Q ss_pred CHHHHCCHHHH----HHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC
Q ss_conf 87782397999----999999999866146776707997378855778999999861
Q gi|254780552|r 26 TLEEFTGQVEA----CSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVAREL 78 (334)
Q Consensus 26 ~l~dviGQ~~~----~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l 78 (334)
T Consensus 114 TLDdYV~~gimtaaQ~d~l~~Av~a---r~----NIlv~GGTGSGKTTLaNAlla~I 163 (315)
T TIGR02782 114 TLDDYVEAGIMTAAQRDVLREAVAA---RK----NILVVGGTGSGKTTLANALLAEI 163 (315)
T ss_pred CCHHHHHHCCCCHHHHHHHHHHHHH---CC----CEEEECCCCCCHHHHHHHHHHHH
T ss_conf 7077764044557899999999971---29----88998145885799999999988