HHsearch alignment for GI: 254780552 and conserved domain: TIGR03015
>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily. Members of this protein are marked as probable ATPases by the nucleotide binding P-loop motif GXXGXGKTT, a motif DEAQ similar to the DEAD/H box of helicases, and extensive homology to ATPases of MSHA-type pilus systems and to GspA proteins associated with type II protein secretion systems.
Probab=99.69 E-value=9.3e-16 Score=115.86 Aligned_cols=205 Identities=22% Similarity=0.254 Sum_probs=135.4
Q ss_pred HCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCC---CCCCCCCCCCCHHHH----------
Q ss_conf 2397999999999999866146776707997378855778999999861898---531257644334676----------
Q gi|254780552|r 30 FTGQVEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVARELGVN---FRSTSGPVIAKAGDL---------- 96 (334)
Q Consensus 30 viGQ~~~~~~l~~~i~a~~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~---~~~~s~~~~~~~~dl---------- 96 (334)
T Consensus 25 s~~h~~al~~L~~~l~~~----~g~--~lltGe~GtGKTtllr~l~~~l~~~~~~~~~i~~~~l~-~~~ll~~i~~~lg~ 97 (269)
T TIGR03015 25 SKGHKRAMAYLEYGLSQR----EGF--ILITGEVGAGKTTLIRNLLKRLDQERVVAAKLVNTRVD-AEDLLRMVAADFGL 97 (269)
T ss_pred CHHHHHHHHHHHHHHHCC----CCE--EEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCC-HHHHHHHHHHHCCC
T ss_conf 866999999999999648----965--99972998988999999998459345489997699999-99999999998598
Q ss_pred --------------HHHH---HHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEEC
Q ss_conf --------------6666---64101637888757616989999999986347510025678765200046674005520
Q gi|254780552|r 97 --------------AALL---TNLEDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAA 159 (334)
Q Consensus 97 --------------~~~~---~~~~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~A 159 (334)
T Consensus 98 ~~~~~~~~~~~~~l~~~L~~~~~~g~~~vliIDEAq~L~~~~Le~Lr~L~n-~-------e~~~~~ll-----~iiL~Gq 164 (269)
T TIGR03015 98 ETEGRDKAALLRELEDFLIEQFAAGKRALLVVDEAQNLTPELLEELRMLSN-F-------QTDNAKLL-----QIFLVGQ 164 (269)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCHHHHHHHHHHHC-C-------CCCCCCCE-----EEEEECC
T ss_conf 988989999999999999999966994699972422199999999999970-1-------35888704-----8999578
Q ss_pred CCCCCCC----CHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCC----CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf 4554335----5454420120673264547999998777654121----0111111123320221015678877754333
Q gi|254780552|r 160 TTRVGLL----TNPLQDRFGIPIRLNFYEIEDLKTIVQRGAKLTG----LAVTDEAACEIAMRSRGTPRIAGRLLRRVRD 231 (334)
Q Consensus 160 Tt~~~~l----~~~l~sR~~~~~~~~~~~~~el~~il~~~~~~~~----i~~~~~al~~ia~~s~Gd~R~AlnlLe~v~d 231 (334)
T Consensus 165 peL~~~L~~~~~~~l~qRI~~~~~L~pl~~eet~~YI~~RL~~AG~~~~~~Ft~~A~~~I~~~S~G~PR~IN~Lc~~aLl 244 (269)
T TIGR03015 165 PEFRETLQSPQLQQLRQRIIASCHLGPLDREETREYIEHRLERAGNRDAPVFSEGAFDAIHRFSRGIPRLINILCDRLLL 244 (269)
T ss_pred HHHHHHHCCCCHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 67999872740254555076799847999899999999999866999999859999999999869900899999999999
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 45541588642778787654210
Q gi|254780552|r 232 FAEVAHAKTITREIADAALLRLA 254 (334)
Q Consensus 232 ~a~~~~~~~i~~~~~~~~l~~~~ 254 (334)
T Consensus 245 ~a~~~~~~~I~~~~v~~~~~el~ 267 (269)
T TIGR03015 245 SAFLEEKREIGGEEVREVIAEID 267 (269)
T ss_pred HHHHHCCCCCCHHHHHHHHHHHC
T ss_conf 99994888679999999999762