HHsearch alignment for GI: 254780552 and conserved domain: cd01120
>cd01120 RecA-like_NTPases RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and related helicases as well as bacterial RecA and related eukaryotic and archaeal recombinases. This group also includes bacterial conjugation proteins and related DNA transfer proteins involved in type II and type IV secretion.
Probab=96.74 E-value=0.0013 Score=41.58 Aligned_cols=22 Identities=50% Similarity=0.756 Sum_probs=19.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHC
Q ss_conf 7997378855778999999861
Q gi|254780552|r 57 VLFVGPPGLGKTTLAQVVAREL 78 (334)
Q Consensus 57 ~Lf~GPpG~GKTtlA~iiA~~l 78 (334)
T Consensus 2 ~li~g~~g~GKttl~~~~~~~~ 23 (165)
T cd01120 2 ILVFGPTGSGKTTLALQLALNI 23 (165)
T ss_pred EEEECCCCCCHHHHHHHHHHHH
T ss_conf 8999899998999999999998