HHsearch alignment for GI: 254780552 and conserved domain: cd01394

>cd01394 radB RadB. The archaeal protein radB shares similarity radA, the archaeal functional homologue to the bacterial RecA. The precise function of radB is unclear.

Probab=96.68  E-value=0.0025  Score=39.84  Aligned_cols=26  Identities=42%  Similarity=0.572  Sum_probs=20.3

Q ss_pred             CCCCE-EEECCCCCCHHHHHHHHHHHC
Q ss_conf             76707-997378855778999999861
Q gi|254780552|r   53 ALDHV-LFVGPPGLGKTTLAQVVAREL   78 (334)
Q Consensus        53 ~~~h~-Lf~GPpG~GKTtlA~iiA~~l   78 (334)
T Consensus        17 ~~G~it~i~G~pG~GKStl~lq~a~~~   43 (218)
T cd01394          17 ERGTVTQVYGPPGTGKTNIAIQLAVET   43 (218)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf             788799998999984999999999998