HHsearch alignment for GI: 254780552 and conserved domain: cd03293

>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.66  E-value=0.0083  Score=36.67  Aligned_cols=22  Identities=45%  Similarity=0.718  Sum_probs=19.3

Q ss_pred             EEEECCCCCCHHHHHHHHHHHC
Q ss_conf             7997378855778999999861
Q gi|254780552|r   57 VLFVGPPGLGKTTLAQVVAREL   78 (334)
Q Consensus        57 ~Lf~GPpG~GKTtlA~iiA~~l   78 (334)
T Consensus        33 ~~iiGpsGsGKSTLl~~i~Gl~   54 (220)
T cd03293          33 VALVGPSGCGKSTLLRIIAGLE   54 (220)
T ss_pred             EEEECCCCCHHHHHHHHHHCCC
T ss_conf             9999999957999999997599