>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=96.33  E-value=0.0026  Score=39.72  Aligned_cols=22  Identities=32%  Similarity=0.596  Sum_probs=19.2

Q ss_pred             EEEECCCCCCHHHHHHHHHHHC
Q ss_conf             7997378855778999999861
Q gi|254780552|r   57 VLFVGPPGLGKTTLAQVVAREL   78 (334)
Q Consensus        57 ~Lf~GPpG~GKTtlA~iiA~~l   78 (334)
T Consensus        53 ~~ivG~SGsGKSTLLr~i~GL~   74 (269)
T cd03294          53 FVIMGLSGSGKSTLLRCINRLI   74 (269)
T ss_pred             EEEECCCCCHHHHHHHHHHCCC
T ss_conf             9999899848999999997599