HHsearch alignment for GI: 254780552 and conserved domain: pfam00493

Probab=99.74  E-value=4.9e-17  Score=123.68  Aligned_cols=146  Identities=25%  Similarity=0.278  Sum_probs=91.1

Q ss_pred             HHCCHHHHHHHHHHHHHHHHH---------CCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCH------
Q ss_conf             823979999999999998661---------46776707997378855778999999861898531257644334------
Q gi|254780552|r   29 EFTGQVEACSNLKVFIEAAKA---------RAEALDHVLFVGPPGLGKTTLAQVVARELGVNFRSTSGPVIAKA------   93 (334)
Q Consensus        29 dviGQ~~~~~~l~~~i~a~~~---------~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~~~~~~~------   93 (334)
T Consensus        25 ~i~G~~~vK~ai~l~l~gg~~~~~~~~~~~Rg~--ihiLLvGdPG~gKSqlLk~~~~~~pr~-~~tsg~~ss~~GLTa~~  101 (327)
T pfam00493        25 SIYGHEDVKKAILLQLFGGVKKNLPDGTRLRGD--INVLLVGDPGTAKSQLLKYVAKLAPRA-VYTSGKGSSAAGLTAAV  101 (327)
T ss_pred             CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC--CEEEEECCCCCCHHHHHHHHHHHCCCC-EEECCCCCCCCCCEEEE
T ss_conf             124987999999999808987658888620365--118984699815609999999868870-88317766567761589


Q ss_pred             -HHH--------HHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCC
Q ss_conf             -676--------66666410163788875761698999999998634751002567876520004667400552045543
Q gi|254780552|r   94 -GDL--------AALLTNLEDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRVG  164 (334)
Q Consensus        94 -~dl--------~~~~~~~~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~~  164 (334)
T Consensus       102 ~~d~~~~~~~leaGalv-lAd~Gv~cIDEfdk~~~~d~saL~EAMEqqtVsI--aKaG--i~~tL-~ar~sVlAaaNP~~  175 (327)
T pfam00493       102 VRDPDTGEWTLEAGALV-LADGGVCCIDEFDKMNEEDRVAIHEAMEQQTISI--AKAG--IVATL-NARCSVLAAANPIF  175 (327)
T ss_pred             EEECCCCCEEEECCCEE-ECCCCEEEEECCCCCCHHHHHHHHHHHHHCEEEE--ECCC--EEEEE-CCCCEEEEEECCCC
T ss_conf             98068883698368477-5589827850055588767999999998681776--3385--38972-58717998527767


Q ss_pred             -------------CCCHHHHHCCCCEEECCCC
Q ss_conf             -------------3554544201206732645
Q gi|254780552|r  165 -------------LLTNPLQDRFGIPIRLNFY  183 (334)
Q Consensus       165 -------------~l~~~l~sR~~~~~~~~~~  183 (334)
T Consensus       176 g~yd~~~~~~~ni~Lp~~lLsRFDLif~l~D~  207 (327)
T pfam00493       176 GRYDPKKSVAENINLPPPLLSRFDLIFVLLDK  207 (327)
T ss_pred             CCCCCCCCHHHHCCCCHHHHCCEEEEEEEECC
T ss_conf             73788889888558976774501079884068