HHsearch alignment for GI: 254780552 and conserved domain: pfam00910
>pfam00910 RNA_helicase RNA helicase. This family includes RNA helicases thought to be involved in duplex unwinding during viral RNA replication. Members of this family are found in a variety of single stranded RNA viruses.
Probab=97.87 E-value=5.1e-06 Score=56.33 Aligned_cols=64 Identities=27% Similarity=0.363 Sum_probs=36.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCCC-CCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHH
Q ss_conf 7997378855778999999861898531257-6443346766666641016378887576169899
Q gi|254780552|r 57 VLFVGPPGLGKTTLAQVVARELGVNFRSTSG-PVIAKAGDLAALLTNLEDRDVLFIDEIHRLSIIV 121 (334)
Q Consensus 57 ~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~-~~~~~~~dl~~~~~~~~~~~vlfiDEihrl~~~~ 121 (334)
T Consensus 1 i~l~G~~G~GKS~~a~~la~~~~~~~~~~~~~~~Y~~~~~~-~~wdgY~gq~vvi~DD~~~~~~~~ 65 (105)
T pfam00910 1 IWLYGPPGCGKSTLAKYLARALLDHLGLPKKDSVYSRNPDD-DFWDGYTGQPVVIIDDFGQNPDGP 65 (105)
T ss_pred CEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC-CCCCCCCCCEEEEEECCCCCCCCC
T ss_conf 98979998988999999999999983778789779678877-656788998579996577788862