HHsearch alignment for GI: 254780552 and conserved domain: pfam05729

>pfam05729 NACHT NACHT domain. This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation. This family is closely related to pfam00931.

Probab=96.58  E-value=0.0019  Score=40.61  Aligned_cols=22  Identities=45%  Similarity=0.533  Sum_probs=19.5

Q ss_pred             CEEEECCCCCCHHHHHHHHHHH
Q ss_conf             0799737885577899999986
Q gi|254780552|r   56 HVLFVGPPGLGKTTLAQVVARE   77 (334)
Q Consensus        56 h~Lf~GPpG~GKTtlA~iiA~~   77 (334)
T Consensus         2 ~i~i~G~aG~GKTtll~kl~~~   23 (165)
T pfam05729         2 TVILQGEAGSGKTTLLQKLALL   23 (165)
T ss_pred             EEEEECCCCCCHHHHHHHHHHH
T ss_conf             8999827989899999999999