HHsearch alignment for GI: 254780552 and conserved domain: pfam06144
>pfam06144 DNA_pol3_delta DNA polymerase III, delta subunit. DNA polymerase III, delta subunit (EC 2.7.7.7) is required for, along with delta' subunit, the assembly of the processivity factor beta(2) onto primed DNA in the DNA polymerase III holoenzyme-catalysed reaction. The delta subunit is also known as HolA.
Probab=96.94 E-value=0.0042 Score=38.46 Aligned_cols=58 Identities=17% Similarity=0.170 Sum_probs=50.8
Q ss_pred HCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 2012067326454799999877765412101111111233202210156788777543
Q gi|254780552|r 172 DRFGIPIRLNFYEIEDLKTIVQRGAKLTGLAVTDEAACEIAMRSRGTPRIAGRLLRRV 229 (334)
Q Consensus 172 sR~~~~~~~~~~~~~el~~il~~~~~~~~i~~~~~al~~ia~~s~Gd~R~AlnlLe~v 229 (334)
T Consensus 113 ~k~~~~i~~~~~~~~~l~~wi~~~~~~~g~~i~~~a~~~L~~~~g~nl~~l~~EieKL 170 (172)
T pfam06144 113 KKKATVVECFTLKEEELIQWIQKRAKELGLKIEKDALQLLAEKVENNLLAIAQELEKL 170 (172)
T ss_pred HHCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_conf 8376699934898789999999999984999899999999999784899999999976