HHsearch alignment for GI: 254780553 and conserved domain: COG0258
>COG0258 Exo 5'-3' exonuclease (including N-terminal domain of PolI) [DNA replication, recombination, and repair].
Probab=93.28 E-value=0.24 Score=29.62 Aligned_cols=21 Identities=29% Similarity=0.507 Sum_probs=11.7
Q ss_pred HHHCCCHHHHHHHCCCCHHHH
Q ss_conf 100051011244315789999
Q gi|254780553|r 78 VQGVGARVAMGVLSRITATEL 98 (207)
Q Consensus 78 V~GIGpK~AL~iLs~l~~~~l 98 (207)
T Consensus 203 V~GIG~ktA~~Ll~~~gs~e~ 223 (310)
T COG0258 203 VKGIGPKTALKLLQEYGSLEG 223 (310)
T ss_pred CCCCCHHHHHHHHHHHCCHHH
T ss_conf 998389999999998385999