HHsearch alignment for GI: 254780553 and conserved domain: COG1796
>COG1796 POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair].
Probab=93.76 E-value=0.36 Score=28.50 Aligned_cols=51 Identities=24% Similarity=0.307 Sum_probs=21.3
Q ss_pred HHHHHHHHHCCCHHHH---HHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHH
Q ss_conf 9998501000510112---44315789999999851566875104571167999999
Q gi|254780553|r 72 FMLLQSVQGVGARVAM---GVLSRITATELVESIILQNSKVIAQIPGISMKIASRIM 125 (207)
Q Consensus 72 F~~Li~V~GIGpK~AL---~iLs~l~~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi 125 (207)
T Consensus 92 l~~Ll~v~GlGpkKi~~Ly~elgi~~~e~l~~a~~~~~---~~~l~GfG~kse~~il 145 (326)
T COG1796 92 LEPLLKVPGLGPKKIVSLYKELGIKDLEELQEALENGK---IRGLRGFGKKSEAKIL 145 (326)
T ss_pred HHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC---CCCCCCCCCHHHHHHH
T ss_conf 58786077989288999999978664999999998477---0326785602199999