HHsearch alignment for GI: 254780553 and conserved domain: PRK05755
>PRK05755 DNA polymerase I; Provisional.
Probab=94.43 E-value=0.078 Score=32.91 Aligned_cols=135 Identities=19% Similarity=0.224 Sum_probs=66.7
Q ss_pred EEEEECCHHHHHHCCCCCCEEEEEEEEEEC----CCCEEEEEEECHHHHHHHHHHH--------HHHHCCCHHHHHHHCC
Q ss_conf 238970868898502479849999999973----8841899970677999999985--------0100051011244315
Q gi|254780553|r 25 CYIIYCPIRTLSCLGKIGDFCTLFVETHMR----QDQIRLFGFLSDLDRQWFMLLQ--------SVQGVGARVAMGVLSR 92 (207)
Q Consensus 25 GY~i~vs~~~~~~l~~~g~~v~l~~~~~vr----Ed~~~LyGF~~~~Er~~F~~Li--------~V~GIGpK~AL~iLs~ 92 (207)
T Consensus 127 ~~~v~i~s~DkD~~QLv~~~v~~~~~~k~~~~~~~~v~ek~Gv~P~q~~D-~~aL~GD~sDNIPGVpGIG~KtA~kLl~~ 205 (889)
T PRK05755 127 GFEVLIVTGDKDLLQLVDDNVTVLNTMKNERIDPEGVIEKYGVTPEQIID-FLALMGDSSDNIPGVPGVGEKTAAKLLKE 205 (889)
T ss_pred CCEEEEEECCCCHHHHCCCCEEEEECCCCCEECHHHHHHHHCCCHHHHHH-HHHHCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99599980898785618898699989999285899999997969899999-99980886457899886269999999986
Q ss_pred CC-HHHHHHHHHCCCHHHHHHCCCCCHHHHHHHH-----HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 78-9999999851566875104571167999999-----99742221101133443233333445555653158999999
Q gi|254780553|r 93 IT-ATELVESIILQNSKVIAQIPGISMKIASRIM-----TELKGKAISLSSVVQQDMSCVNKEQAHICSMPSFAINAISA 166 (207)
Q Consensus 93 l~-~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi-----~ELk~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~A 166 (207)
T Consensus 206 ygsle~i~~~~d--------~i~--g~k~~~~l~~~~e~a~ls~~L~ti~~dvpl~~~-----le~l~~~~~d~~~l~~l 270 (889)
T PRK05755 206 FGSLEGLYENLD--------EIK--GKKLKEKLRENKEQAFLSRKLATIKTDVPLDVD-----LEDLELKPPDREKLIAL 270 (889)
T ss_pred CCCHHHHHHHHH--------HCC--CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-----HHHHCCCCCCHHHHHHH
T ss_conf 786899999898--------523--256788898469999999998565228989999-----99922589999999999
Q ss_pred HHHCCCCHH
Q ss_conf 996799989
Q gi|254780553|r 167 LVNLGYGQD 175 (207)
Q Consensus 167 L~~LGy~~~ 175 (207)
T Consensus 271 f~elEFksL 279 (889)
T PRK05755 271 LKKLEFKSL 279 (889)
T ss_pred HHHHCCHHH
T ss_conf 998285999