HHsearch alignment for GI: 254780553 and conserved domain: PRK07956
>PRK07956 ligA NAD-dependent DNA ligase LigA; Validated.
Probab=91.63 E-value=0.19 Score=30.29 Aligned_cols=72 Identities=17% Similarity=0.283 Sum_probs=50.5
Q ss_pred CCCCEEEEEEECHHHHHHHHHH--------------HHHHHCCCHHHHHHHCCCC-HHHHHHHHHCCCHHHHHHCCCCCH
Q ss_conf 3884189997067799999998--------------5010005101124431578-999999985156687510457116
Q gi|254780553|r 54 RQDQIRLFGFLSDLDRQWFMLL--------------QSVQGVGARVAMGVLSRIT-ATELVESIILQNSKVIAQIPGISM 118 (207)
Q Consensus 54 rEd~~~LyGF~~~~Er~~F~~L--------------i~V~GIGpK~AL~iLs~l~-~~~l~~aI~~~D~~~L~~vpGIGk 118 (207)
T Consensus 478 ~~~L~~l~gfgeKsa~nLl~aIe~SK~~~l~r~L~ALGI~~VG~~~Ak~La~~f~sl~~----l~~as~e~L~~I~giG~ 553 (668)
T PRK07956 478 EEDLLQLEGFGEKSAQNLLDAIEKSKETPLARFLYALGIRHVGEKAAKALARHFGSLEA----LEAASEEELAAVEGIGE 553 (668)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCHHH----HHHCCHHHHHCCCCCCH
T ss_conf 54540212355669999999999854775888998627864129999999999668999----97089999857688449
Q ss_pred HHHHHHHHHHH
Q ss_conf 79999999974
Q gi|254780553|r 119 KIASRIMTELK 129 (207)
Q Consensus 119 KtA~rIi~ELk 129 (207)
T Consensus 554 ~~A~si~~ff~ 564 (668)
T PRK07956 554 EVAQSIVEFFA 564 (668)
T ss_pred HHHHHHHHHHC
T ss_conf 99999999970