HHsearch alignment for GI: 254780553 and conserved domain: smart00483
>smart00483 POLXc DNA polymerase X family. includes vertebrate polymerase beta and terminal deoxynucleotidyltransferases
Probab=96.15 E-value=0.0065 Score=40.10 Aligned_cols=55 Identities=15% Similarity=0.255 Sum_probs=39.4
Q ss_pred HHHHHHHHCCCHHHHHHH---CCCCHHHHHHHHHC---CCHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 998501000510112443---15789999999851---566875104571167999999997
Q gi|254780553|r 73 MLLQSVQGVGARVAMGVL---SRITATELVESIIL---QNSKVIAQIPGISMKIASRIMTEL 128 (207)
Q Consensus 73 ~~Li~V~GIGpK~AL~iL---s~l~~~~l~~aI~~---~D~~~L~~vpGIGkKtA~rIi~EL 128 (207)
T Consensus 48 ~~l~~ipGIG~~ia~kI~Eil~TG~~~~~e~~~~~~~~~~l~el~~I~GvGpk~a~~l~-~~ 108 (334)
T smart00483 48 KDLKGLPGIGDKIKKKIEEIIETGKSSKVLEILNDEVYKSLKLFTNVFGVGPKTAAKWY-RK 108 (334)
T ss_pred HHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHH-HC
T ss_conf 99727999878999999999984994899998728651689998538887789999999-84