HHsearch alignment of GI: 254780553 and MMDB domain: 1a76_A_210-274

>1a76_A (A:210-274) Flap endonuclease-1 protein; 5'-3' EXO/endo nuclease, DNA replication, RTH, RAD27, DNA repair; 2.00A {Methanococcus jannaschii}

Probab=94.94  E-value=0.021  Score=36.26  Aligned_cols=37  Identities=16%  Similarity=0.271  Sum_probs=28.9

Q ss_pred             CHHHHHH-HHHCCCHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             8999999-985156687510457116799999999742
Q gi|254780553|r   94 TATELVE-SIILQNSKVIAQIPGISMKIASRIMTELKG  130 (207)
Q Consensus        94 ~~~~l~~-aI~~~D~~~L~~vpGIGkKtA~rIi~ELk~  130 (207)
                      +|++|+. ++..||..-+..|||||+|||-+++-+.++
T Consensus         1 tp~q~id~~~L~G~d~nipGV~GIGpKtA~~li~~~~~   38 (65)
T 1a76_A            1 SLDDLIDIAIFMGTDYNPGGVKGIGFKRAYELVRSGVA   38 (65)
T ss_dssp             CHHHHHHHHHHHCCTTSTTTTTTCCHHHHHHHHHHTCH
T ss_pred             CHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHCCC
T ss_conf             89999999985697556555685629999999997299