HHsearch alignment of GI: 254780553 and MMDB domain: 1cuk_A_145-203

>1cuk_A (A:145-203) RUVA protein; DNA repair, SOS response, DNA-binding, DNA recombination, helicase; 1.90A {Escherichia coli}

Probab=98.54  E-value=1.3e-07  Score=71.04  Aligned_cols=50  Identities=30%  Similarity=0.370  Sum_probs=42.7

Q ss_pred             CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf             55653158999999996799989999999999851688889899999999974
Q gi|254780553|r  153 ICSMPSFAINAISALVNLGYGQDQATTAVVSVLKKEKNIADDSQIIRLALRAI  205 (207)
Q Consensus       153 ~~~~~~~~~d~~~AL~~LGy~~~ea~~ai~~i~~~~~~~~~~eelIk~aLk~L  205 (207)
                      ....++..+|+++||++|||++.|+.+++..+.   .+..++|++||.|||.|
T Consensus         9 ~~~~~~~~~eAv~AL~aLGY~~~ea~kav~~i~---~~~~s~eelIk~ALk~L   58 (59)
T 1cuk_A            9 SPATDDAEQEAVARLVALGYKPQEASRMVSKIA---RPDASSETLIREALRAA   58 (59)
T ss_dssp             ---CCHHHHHHHHHHHHHTCCHHHHHHHHHHSC---CSSCCHHHHHHHHHHTT
T ss_pred             CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH---CCCCCHHHHHHHHHHHC
T ss_conf             767773599999999986999999999999861---68999999999999970