HHsearch alignment of GI: 254780553 and MMDB domain: 1ixr_A_

>1ixr_A (A:) Holliday junction DNA helicase RUVA; heterooligomeric complex, octameric RUVA, AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ANP; 3.30A {Thermus thermophilus}
Probab=100.00  E-value=0  Score=362.38  Aligned_cols=191  Identities=25%  Similarity=0.394  Sum_probs=176.5

Q ss_pred             CCCEEEEEEEEEECCEEEEEECCEEEEEECCHHHHHHCCCCCCEEEEEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHH
Q ss_conf             93258999999609979998588323897086889850247984999999997388418999706779999999850100
Q gi|254780553|r    1 MIGKIKGNIEGLYEDYVLIDVQGVCYIIYCPIRTLSCLGKIGDFCTLFVETHMRQDQIRLFGFLSDLDRQWFMLLQSVQG   80 (207)
Q Consensus         1 MI~~i~G~i~~~~~~~ivi~v~GvGY~i~vs~~~~~~l~~~g~~v~l~~~~~vrEd~~~LyGF~~~~Er~~F~~Li~V~G   80 (207)
                      ||+|++|+|.++++++++++|+|+||+|++|.++...+ +.|+++.||||+++|||++.||||.++.||++|++|++|+|
T Consensus         1 MI~~l~G~v~~~~~~~~ii~~~gvGy~i~~~~~~~~~l-~~~~~~~l~~~~~vred~~~l~GF~~~~er~~F~~L~~V~G   79 (191)
T 1ixr_A            1 MIRYLRGLVLKKEAGGFVLLAGGVGFFLQAPTPFLQAL-EEGKEVGVHTHLLLKEEGLSLYGFPDEENLALFELLLSVSG   79 (191)
T ss_dssp             CCCEEEEEEEEECSSEEEEECSSEEEEEECCHHHHHHC-CTTSEEEEEECCCCCSSCCCEEEESSHHHHHHHHHHHSSSC
T ss_pred             CCCEEEEEEEEEECCEEEEEECCEEEEEECCHHHHHHC-CCCCEEEEEEEEEEEECCCEEECCCCHHHHHHHHHHHCCCC
T ss_conf             95669999999839979999899899999277999746-79986999999999607866771082899999999857588


Q ss_pred             CCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             05101124431578999999985156687510457116799999999742221101133443233333445555653158
Q gi|254780553|r   81 VGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKIASRIMTELKGKAISLSSVVQQDMSCVNKEQAHICSMPSFA  160 (207)
Q Consensus        81 IGpK~AL~iLs~l~~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi~ELk~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (207)
                      ||||+|++|||++++++++++|.++|.+.|+++||||+|||+||++|||+|+.++....             ....++..
T Consensus        80 IGpk~Al~iL~~~~~~el~~aI~~~d~~~L~~ipGIG~KtA~rIi~eLk~k~~~~~~~~-------------~~~~~~~~  146 (191)
T 1ixr_A           80 VGPKVALALLSALPPRLLARALLEGDARLLTSASGVGRRLAERIALELKGKVPPHLLAG-------------EKVESEAA  146 (191)
T ss_dssp             CCHHHHHHHHHHSCHHHHHHHHHTTCHHHHTTSTTCCHHHHHHHHHHHTTTSCSCC------------------------
T ss_pred             CCHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCC-------------CCCCCCCH
T ss_conf             47788999985599999999998289998513888456889999999986425210011-------------23355568


Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
Q ss_conf             9999999967999899999999998516888898999999999745
Q gi|254780553|r  161 INAISALVNLGYGQDQATTAVVSVLKKEKNIADDSQIIRLALRAIS  206 (207)
Q Consensus       161 ~d~~~AL~~LGy~~~ea~~ai~~i~~~~~~~~~~eelIk~aLk~Ls  206 (207)
                      +|+++||.+|||++++|++++.++..+.++ .++|++||.|||+|.
T Consensus       147 ~e~~~aL~~LGy~~~ea~~ai~~~~~~~~~-~~~e~li~~aLk~l~  191 (191)
T 1ixr_A          147 EEAVMALAALGFKEAQARAVVLDLLAQNPK-ARAQDLIKEALKRLR  191 (191)
T ss_dssp             ----------------------------------------------
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHCC
T ss_conf             999999998699999999999999842999-999999999999639