HHsearch alignment of GI: 254780553 and MMDB domain: 1ngn_A_1-129
>1ngn_A (A:1-129) Methyl-CPG binding protein MBD4; mismacth repair in methylated DNA, DNA binding protein; 2.10A {Mus musculus}
Probab=94.37 E-value=0.027 Score=35.49 Aligned_cols=45 Identities=9% Similarity=0.056 Sum_probs=30.7
Q ss_pred HHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHH
Q ss_conf 501000510112443157899999998515668751045711679999999
Q gi|254780553|r 76 QSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKIASRIMT 126 (207)
Q Consensus 76 i~V~GIGpK~AL~iLs~l~~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi~ 126 (207)
+.--|...+.|-.|. ++.+.+..+..+.|+++||||+|||+=+.+
T Consensus 78 i~~~G~~~~Ka~~i~------~~a~~~~~e~~~~L~~l~GIG~~tA~~vll 122 (129)
T 1ngn_A 78 LKPLGLYDLRAKTII------KFSDEYLTKQWRYPIELHGIGKYGNDSYRI 122 (129)
T ss_dssp TGGGSCHHHHHHHHH------HHHHHHHHSCCSSGGGSTTCCHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHH------HHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 812447999999999------998246663476656279966899999999