HHsearch results for GI: 254780553 and protein with PDBid: 1dgs_A

>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A*

Probab=94.18  E-value=0.049  Score=32.76  Aligned_cols=52  Identities=17%  Similarity=0.310  Sum_probs=33.0

Q ss_pred             HHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             5010005101124431578999999985156687510457116799999999742
Q gi|254780553|r   76 QSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKIASRIMTELKG  130 (207)
Q Consensus        76 i~V~GIGpK~AL~iLs~l~~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi~ELk~  130 (207)
                      +++.|||.++|-.+.+.+..   ...+.+-....|..++|||+++|+.|+--+++
T Consensus       510 LGIp~vG~~~ak~L~~~f~~---l~~l~~as~e~L~~I~GIG~~~A~si~~~f~~  561 (667)
T 1dgs_A          510 LGLPGVGEVLARNLARRFGT---MDRLLEASLEELIEVEEVGELTARAILETLKD  561 (667)
T ss_dssp             TTCSSCCHHHHHHHHHTTSB---HHHHTTCCHHHHHTSTTCCHHHHHHHHHHHHC
T ss_pred             CCCCCCCHHHHHHHHHHCCC---HHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCC
T ss_conf             06787448999999887599---99986079999857799489999999999759