HHsearch results for GI: 254780553 and protein with PDBid: 1ixr_A

>1ixr_A Holliday junction DNA helicase RUVA; heterooligomeric complex, octameric RUVA, AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ANP; 3.30A {Thermus thermophilus} SCOP: a.60.2.1 b.40.4.2
Probab=100.00  E-value=0  Score=408.45  Aligned_cols=190  Identities=25%  Similarity=0.404  Sum_probs=174.0

Q ss_pred             CCCEEEEEEEEEECCEEEEEECCEEEEEECCHHHHHHCCCCCCEEEEEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHH
Q ss_conf             93258999999609979998588323897086889850247984999999997388418999706779999999850100
Q gi|254780553|r    1 MIGKIKGNIEGLYEDYVLIDVQGVCYIIYCPIRTLSCLGKIGDFCTLFVETHMRQDQIRLFGFLSDLDRQWFMLLQSVQG   80 (207)
Q Consensus         1 MI~~i~G~i~~~~~~~ivi~v~GvGY~i~vs~~~~~~l~~~g~~v~l~~~~~vrEd~~~LyGF~~~~Er~~F~~Li~V~G   80 (207)
                      ||+||+|++.+++++++|||||||||+|+||.+++..+ +.|++++||||++||||+++||||.+.+||++|++|++|+|
T Consensus         1 MI~~l~G~i~~~~~~~vvl~v~GvGY~v~v~~~~~~~l-~~g~~v~l~t~~~vrEd~~~LyGF~~~~Er~lF~~Li~V~G   79 (191)
T 1ixr_A            1 MIRYLRGLVLKKEAGGFVLLAGGVGFFLQAPTPFLQAL-EEGKEVGVHTHLLLKEEGLSLYGFPDEENLALFELLLSVSG   79 (191)
T ss_dssp             CCCEEEEEEEEECSSEEEEECSSEEEEEECCHHHHHHC-CTTSEEEEEECCCCCSSCCCEEEESSHHHHHHHHHHHSSSC
T ss_pred             CCCEEEEEEEEEECCEEEEEECCEEEEEECCHHHHHHC-CCCCEEEEEEEEEEEECCCEEECCCCHHHHHHHHHHHCCCC
T ss_conf             94579999999839979999899899998377899746-89987999999999607866771182899999999857688


Q ss_pred             CCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             05101124431578999999985156687510457116799999999742221101133443233333445555653158
Q gi|254780553|r   81 VGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKIASRIMTELKGKAISLSSVVQQDMSCVNKEQAHICSMPSFA  160 (207)
Q Consensus        81 IGpK~AL~iLs~l~~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi~ELk~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (207)
                      ||||+||+|||++++++|++||.++|.+.|+++||||||||+|||+|||||+.++....+             ...++..
T Consensus        80 IGpK~Al~ILs~~~~~~l~~aI~~~D~~~L~~vpGIGkKtAerIilELk~K~~~~~~~~~-------------~~~~~~~  146 (191)
T 1ixr_A           80 VGPKVALALLSALPPRLLARALLEGDARLLTSASGVGRRLAERIALELKGKVPPHLLAGE-------------KVESEAA  146 (191)
T ss_dssp             CCHHHHHHHHHHSCHHHHHHHHHTTCHHHHTTSTTCCHHHHHHHHHHHTTTSCSCC------------------------
T ss_pred             CCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC-------------CCCCCCH
T ss_conf             377889888725999999999983999995018884688999999999864342100112-------------3345568


Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf             999999996799989999999999851688889899999999974
Q gi|254780553|r  161 INAISALVNLGYGQDQATTAVVSVLKKEKNIADDSQIIRLALRAI  205 (207)
Q Consensus       161 ~d~~~AL~~LGy~~~ea~~ai~~i~~~~~~~~~~eelIk~aLk~L  205 (207)
                      +|+++||.+|||++.+|++++.++..++++ .++|++||.|||+|
T Consensus       147 ~ea~~AL~~LGy~~~ea~~av~~~~~~~~~-~~~e~lik~ALk~L  190 (191)
T 1ixr_A          147 EEAVMALAALGFKEAQARAVVLDLLAQNPK-ARAQDLIKEALKRL  190 (191)
T ss_dssp             ---------------------------------------------
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHC
T ss_conf             999999998599999999999999852999-99999999999962