HHsearch results for GI: 254780553 and protein with PDBid: 1ixr_A
>1ixr_A Holliday junction DNA helicase RUVA; heterooligomeric complex, octameric RUVA, AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ANP; 3.30A {Thermus thermophilus} SCOP: a.60.2.1 b.40.4.2
Probab=100.00 E-value=0 Score=408.45 Aligned_cols=190 Identities=25% Similarity=0.404 Sum_probs=174.0
Q ss_pred CCCEEEEEEEEEECCEEEEEECCEEEEEECCHHHHHHCCCCCCEEEEEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHH
Q ss_conf 93258999999609979998588323897086889850247984999999997388418999706779999999850100
Q gi|254780553|r 1 MIGKIKGNIEGLYEDYVLIDVQGVCYIIYCPIRTLSCLGKIGDFCTLFVETHMRQDQIRLFGFLSDLDRQWFMLLQSVQG 80 (207)
Q Consensus 1 MI~~i~G~i~~~~~~~ivi~v~GvGY~i~vs~~~~~~l~~~g~~v~l~~~~~vrEd~~~LyGF~~~~Er~~F~~Li~V~G 80 (207)
||+||+|++.+++++++|||||||||+|+||.+++..+ +.|++++||||++||||+++||||.+.+||++|++|++|+|
T Consensus 1 MI~~l~G~i~~~~~~~vvl~v~GvGY~v~v~~~~~~~l-~~g~~v~l~t~~~vrEd~~~LyGF~~~~Er~lF~~Li~V~G 79 (191)
T 1ixr_A 1 MIRYLRGLVLKKEAGGFVLLAGGVGFFLQAPTPFLQAL-EEGKEVGVHTHLLLKEEGLSLYGFPDEENLALFELLLSVSG 79 (191)
T ss_dssp CCCEEEEEEEEECSSEEEEECSSEEEEEECCHHHHHHC-CTTSEEEEEECCCCCSSCCCEEEESSHHHHHHHHHHHSSSC
T ss_pred CCCEEEEEEEEEECCEEEEEECCEEEEEECCHHHHHHC-CCCCEEEEEEEEEEEECCCEEECCCCHHHHHHHHHHHCCCC
T ss_conf 94579999999839979999899899998377899746-89987999999999607866771182899999999857688
Q ss_pred CCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 05101124431578999999985156687510457116799999999742221101133443233333445555653158
Q gi|254780553|r 81 VGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKIASRIMTELKGKAISLSSVVQQDMSCVNKEQAHICSMPSFA 160 (207)
Q Consensus 81 IGpK~AL~iLs~l~~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi~ELk~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (207)
||||+||+|||++++++|++||.++|.+.|+++||||||||+|||+|||||+.++....+ ...++..
T Consensus 80 IGpK~Al~ILs~~~~~~l~~aI~~~D~~~L~~vpGIGkKtAerIilELk~K~~~~~~~~~-------------~~~~~~~ 146 (191)
T 1ixr_A 80 VGPKVALALLSALPPRLLARALLEGDARLLTSASGVGRRLAERIALELKGKVPPHLLAGE-------------KVESEAA 146 (191)
T ss_dssp CCHHHHHHHHHHSCHHHHHHHHHTTCHHHHTTSTTCCHHHHHHHHHHHTTTSCSCC------------------------
T ss_pred CCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC-------------CCCCCCH
T ss_conf 377889888725999999999983999995018884688999999999864342100112-------------3345568
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 999999996799989999999999851688889899999999974
Q gi|254780553|r 161 INAISALVNLGYGQDQATTAVVSVLKKEKNIADDSQIIRLALRAI 205 (207)
Q Consensus 161 ~d~~~AL~~LGy~~~ea~~ai~~i~~~~~~~~~~eelIk~aLk~L 205 (207)
+|+++||.+|||++.+|++++.++..++++ .++|++||.|||+|
T Consensus 147 ~ea~~AL~~LGy~~~ea~~av~~~~~~~~~-~~~e~lik~ALk~L 190 (191)
T 1ixr_A 147 EEAVMALAALGFKEAQARAVVLDLLAQNPK-ARAQDLIKEALKRL 190 (191)
T ss_dssp ---------------------------------------------
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHC
T ss_conf 999999998599999999999999852999-99999999999962