HHsearch results for GI: 254780553 and protein with PDBid: 2ztd_A
>2ztd_A Holliday junction ATP-dependent DNA helicase RUVA; recombination, branch migration, DNA binding, oligomerization, acidic PIN; 2.40A {Mycobacterium tuberculosis} PDB: 2ztc_A 2zte_A 2h5x_A 1bvs_A
Probab=100.00 E-value=0 Score=415.74 Aligned_cols=193 Identities=30% Similarity=0.416 Sum_probs=177.1
Q ss_pred CCCEEEEEEEEEECCEEEEEECCEEEEEECCHHHHHHCCCCCCEEEEEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHH
Q ss_conf 93258999999609979998588323897086889850247984999999997388418999706779999999850100
Q gi|254780553|r 1 MIGKIKGNIEGLYEDYVLIDVQGVCYIIYCPIRTLSCLGKIGDFCTLFVETHMRQDQIRLFGFLSDLDRQWFMLLQSVQG 80 (207)
Q Consensus 1 MI~~i~G~i~~~~~~~ivi~v~GvGY~i~vs~~~~~~l~~~g~~v~l~~~~~vrEd~~~LyGF~~~~Er~~F~~Li~V~G 80 (207)
||+||+|+|.+++++++|||||||||+|+||.+++..++ .|++++||||++||||+++||||.+.+||++|++|++|+|
T Consensus 17 MI~~l~G~i~~~~~~~vvldv~GvGY~v~v~~~~~~~l~-~g~~v~l~t~~~vrEd~~~LyGF~~~~Er~lF~~Li~VsG 95 (212)
T 2ztd_A 17 MIASVRGEVLEVALDHVVIEAAGVGYRVNATPATLATLR-QGTEARLITAMIVREDSMTLYGFPDGETRDLFLTLLSVSG 95 (212)
T ss_dssp SCCEEEEEEEEECSSEEEEEETTEEEEEECCHHHHTTCC-TTSEEEEEEEEEEETTEEEEEEESSHHHHHHHHHHHTSTT
T ss_pred CEEEEEEEEEEECCCEEEEEECCEEEEEEECHHHHHHCC-CCCEEEEEEEEEECCCCCEEECCCCHHHHHHHHHHHHCCC
T ss_conf 216899999996399899997998899994689998769-9985999999998168875656599899999999983489
Q ss_pred CCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 05101124431578999999985156687510457116799999999742221101133443233333445555653158
Q gi|254780553|r 81 VGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKIASRIMTELKGKAISLSSVVQQDMSCVNKEQAHICSMPSFA 160 (207)
Q Consensus 81 IGpK~AL~iLs~l~~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi~ELk~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (207)
||||+||+|||+++|++|++||.++|.+.|+++||||||||+|||+|||||+..+..... .....++..
T Consensus 96 IGPK~AL~ILs~~~~~~l~~aI~~~D~~~L~~vpGIGkKtAeRIilELkdKl~~~~~~~~-----------~~~~~~~~~ 164 (212)
T 2ztd_A 96 VGPRLAMAALAVHDAPALRQVLADGNVAALTRVPGIGKRGAERMVLELRDKVGVAATGGA-----------LSTNGHAVR 164 (212)
T ss_dssp CCHHHHHHHHHHSCHHHHHHHHHTTCHHHHHTSTTCCHHHHHHHHHHHTTTCC------------------------CCH
T ss_pred CCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC-----------CCCCCCCCH
T ss_conf 774678788854999999999980899998517782488899999999754313334554-----------345664317
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
Q ss_conf 9999999967999899999999998516888898999999999745
Q gi|254780553|r 161 INAISALVNLGYGQDQATTAVVSVLKKEKNIADDSQIIRLALRAIS 206 (207)
Q Consensus 161 ~d~~~AL~~LGy~~~ea~~ai~~i~~~~~~~~~~eelIk~aLk~Ls 206 (207)
.|+++||++|||++++|++++.++.+++++ .++|++||.|||+|+
T Consensus 165 ~e~~~AL~~LGy~~~ea~~av~~i~~~~~~-~~~eelik~ALk~L~ 209 (212)
T 2ztd_A 165 SPVVEALVGLGFAAKQAEEATDTVLAANHD-ATTSSALRSALSLLG 209 (212)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHH
T ss_conf 899999998599989999999999840899-999999999999974