HHsearch results for GI: 254780553 and protein with PDBid: 3c65_A
>3c65_A Uvrabc system protein C; UVRC, endonuclease, nucleotide excision repair, DNA repair, RNAse H, cytoplasm, DNA damage, DNA excision; 1.90A {Bacillus stearothermophilus}
Probab=95.93 E-value=0.001 Score=44.02 Aligned_cols=59 Identities=19% Similarity=0.357 Sum_probs=41.7
Q ss_pred HHHHHHH-HHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 7999999-98501000510112443157899999998515668751045711679999999974
Q gi|254780553|r 67 LDRQWFM-LLQSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKIASRIMTELK 129 (207)
Q Consensus 67 ~Er~~F~-~Li~V~GIGpK~AL~iLs~l~~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi~ELk 129 (207)
..+.++. .|-.|.|||||.+-.+|..+.. +.+|.+-...-|.++ |||+++|++|.-.|.
T Consensus 166 r~k~~~~S~Ld~I~GIG~~~~~~Ll~~Fgs---~~~i~~As~eeL~~v-gI~~~~A~~I~~~l~ 225 (226)
T 3c65_A 166 RQKTMFHSVLDDIPGVGEKRKKALLNYFGS---VKKMKEATVEELQRA-NIPRAVAEKIYEKLH 225 (226)
T ss_dssp ----------------------------------------------------------------
T ss_pred HHHHHCCCCCCCCCCCCHHHHHHHHHHCCC---HHHHHHCCHHHHHHC-CCCHHHHHHHHHHHC
T ss_conf 740320371102688699999999998189---999973899999876-999999999999962